Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1120 ATGATTAAAACTGTAGATCCTAAACAAAACAACAAGGAGCCATTCTGCTCCTTAATTGCAATGGAACACCCCTTGTCAATTCAATGCCGCCTTCTCATCTCTTTCATATTTTCATCCTATTTGACTGCAACACAATCTTCGATAATTCCAAGGTTGAGCCCTGTTGGGGACATAACCTTACACGACTCTGCAGCCCTGATGACAGCAGAAGATACGGATACAGATACAGAGGAATTGAAAACTTTCTATTTCAAACAGACACTTGATCACTTCAACTATAGGCCAGATAGCTACACAACATTTCCACAAAGATATCTGATCAATTTCAAGTACTGGGGTGGATCCAATTCCAGTGCTCCCATATTGGCTTACCTTGGAGCAGAAGAACCCATAGATAATGACCTTCAGGTCATTGGATTTCTTAATGATAACGCCCATTCCTTTAAGGCTCTCATAGTTTATATAGAGCACCGGTACTATGGGAAATCGGTGCCATTTGGATCCTTTGAAGCAGCATTGAAGAATGCAAAAACTAGAGGGTATTTCAACTCTGCTCAAGCTATTGCAGATTATGCAGCAGTCCTCATACATATAAAGAAGAAACTGAAGGCACAGAAGTCCCCAGTGATTGTTATTGGAGGATCATATGGTGGAATGCTTGCTTCATGGTTTAGACTCAAGTATCCCCACGTGGCTCTTGGTGCACTTGCTTCATCAGCTCCAATTCTCTATTTTGATAACATCACACCATCAAATGGTTACCATTCTGTTGTCACAAGGGATTTTCGAGAAGCAAGTGAAACATGCTATGAAACCATCCTCAAGTCCTGGTCTGAAATTGACAGAATAGCTTCTGAGACAGATGGCCTTTCCATCCTTAGTCAGAGATTCAACACTTGTCGTCCTCTGAACTCGTCTTCTGAGTTGAAAGACTACCTAGAGACGATGTATAATACTGCAGCTCAATATAATCATCCACCAAGGTATCCAGTTACCGTGGTCTGTGGCGGCATCGATGGAGCAACTTTTGGAAGTGATATTCTCAGTAAGATATTTGCAGGTGTAGTGGCGTATAGAGGCAATGCTACATGTAAAGTCAATGGCCCGACCAATGTAACAGAGACTGCTGTTGGTTGGAGATGGCAGACATGTAGTGAGATGGTGATCCCCATAGGGCGTGGAAATGAAACAATGTTTGAACCAAGCCCTTTCGATCTCAAGAGCTATGTGAGGGATTGCAAGAAGGCATATGGTGTCGCACCTCGGCCACATTGGGTCACTACTTACTATGGAGGCCACGATATCAAATTGGTCCTTCAAAGGTTTGGGAGCAACATCATTTTCTCAAATGGGCTAAGAGATCCATATAGTAGCGGAGGGGTTCTGGACAACATATCAGACACTATCGTTTCCGTCCATACAGTTAACGGATCTCATTGCTTGGATATCCTGAATGCAATGCCAAGCGATCCAGAATGGTTAGGGAAACAACGAAAGGAAGAGATCGAGACGATTAAAGGGTGGATCGCACAGTACTATGCGGATCTTCGCGCGCTCACAGTGTACTAA 1569 0.4328 MIKTVDPKQNNKEPFCSLIAMEHPLSIQCRLLISFIFSSYLTATQSSIIPRLSPVGDITLHDSAALMTAEDTDTDTEELKTFYFKQTLDHFNYRPDSYTTFPQRYLINFKYWGGSNSSAPILAYLGAEEPIDNDLQVIGFLNDNAHSFKALIVYIEHRYYGKSVPFGSFEAALKNAKTRGYFNSAQAIADYAAVLIHIKKKLKAQKSPVIVIGGSYGGMLASWFRLKYPHVALGALASSAPILYFDNITPSNGYHSVVTRDFREASETCYETILKSWSEIDRIASETDGLSILSQRFNTCRPLNSSSELKDYLETMYNTAAQYNHPPRYPVTVVCGGIDGATFGSDILSKIFAGVVAYRGNATCKVNGPTNVTETAVGWRWQTCSEMVIPIGRGNETMFEPSPFDLKSYVRDCKKAYGVAPRPHWVTTYYGGHDIKLVLQRFGSNIIFSNGLRDPYSSGGVLDNISDTIVSVHTVNGSHCLDILNAMPSDPEWLGKQRKEEIETIKGWIAQYYADLRALTVY 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1120 522 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 64 515 - -
Lele09g1120 522 FunFam Serine carboxypeptidase S28 family protein 250 403 - -
Lele09g1120 522 Gene3D Serine carboxypeptidase S28, SKS domain 250 403 IPR042269 -
Lele09g1120 522 SUPERFAMILY alpha/beta-Hydrolases 149 433 IPR029058 -
Lele09g1120 522 Pfam Serine carboxypeptidase S28 86 499 IPR008758 GO:0006508|GO:0008236
Lele09g1120 522 Gene3D alpha/beta hydrolase 83 509 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1120 Lele-ChrLele09 20352725 20355782 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1120 09 20352725 20355782 Lele29g0307 29 1817917 1823180 CCT
Lele09g1120 09 20352725 20355782 Lele30g1108 30 14152426 14157771 CCT
Lele09g1120 09 20352725 20355782 Lele31g1242 31 18704363 18709593 CCT
Lele09g1120 09 20352725 20355782 Lele32g0286 32 1783007 1788353 CCT