Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1117 ATGCCTCGCCGCGTTGGCAGAAAACAACCTGAAGTTCGCCCGCTTCAACCGTCTCTGGATCCATCCCAATCTGCCCCGGGTCAAAATGTTGCTCGAGGCGTGTCACAGGGGGGACCCGGACGTGGTGCTCCCTCTGTATCGATAGCGTCTGCTCCTCCGACTTCGGCCATTACTACAGATGCTCCTCCGGGTAATGAGTTGGCCCAGCTGACGTTGCAGTCTCCGGCGCCTTCGTCGTCAAAGGCCTTGAGATTTGCCGACCGACCAGATTTTGGTAAAATGGGGAAAAAAATTCAAGTTCGTGCGAATCACTTTCTCGTTGATGTTGCTGATAAAGATCTCCATCACTATGATGTATCCATATCTCCAGAAATTACCTCCAAACAGATCAATAGGAATGTGATGAATCAATTAATCCAGTTGTACCGAGAGTCACATCTGGACAAACGAATACCAGCTTATGATGGCCGGAAGAGTCTTTTCACAGCAGGTCCTTTGCCCTTCTTGTCAAAGGAATTTGTTGTCAAGCTGGTTGACAGCGACGAACATGGCAGTTCTTCTGCTTCAACAAAGAGCAAACGTGAGCGCGAGTTTAAGGTTACTATTCGTTATGCTTCCAAGGCTGATCTCCATCATCTGCAGCAGTTTCTAAGGTGTCGACAGCTGGACAATCCACAAGAAACTATTCAAGCACTTGATGTTGTCCTGAGGGCATCTCCATCCGCAAAGTACACTGTTGTCGGGAGATCTTTTTTCTCACCAAGTTTGGGTCAAACTGGTGGGCTTGAATCAAGGTTTACTCTTGATGACAAAAGAACAAGTGTTGTTCAATATTTTCGTGAGAAATACAATGTCGAGCTGAAGTATCTGTCCCTTCCTGCCCTCCAAGCTGGGAATGACACAAAACCTATTTATATGCCAATGGAGCTTTGCAAGATAGCTGCTGGGCAAAGGTACTCAAAGAAACTGAATGAGAGGCAAGTAACTGCACTTTTGAGAGCAACCTGTCAACGACCTTATGATAGGGAGAAGGACATTAGAGAGATGGCCAGACATAACAATTTTAATAGAGACAAGATCGTGCACGAATTTGGAATCAAAGTGAGTGAAGAACTAGCAGTGTGTGATGCACGTGTTTTGCCTCCTCCAAGGCTTAAATATCATGAAACTGGGAAGGAACCAGTTGTTGAACCCATGAGGGGTCAGTGGAATATGATAAACAAGAAAATGATTAATGGTGGAAATGTGCAATACTGGAGTTGTGTGAGCTTTTCCACACGGGTGAGCAGAGATTTGCCACATCAATTCTGTAATGAGTTGGTAAATATGTGCACCAGTAAGGGAATGGTTTTTAATCGAACCCCTTTGCTTCCTATAAGGTCAGCTCCTCCTAGTCAAATAGAGGGAGTTCTTCGAGATGTTTACAAGCACTCTGACAAGAAACTTCAGTTGTTGATTATCATCTTACCTGACATCAAAGGTTCTTATGCCAAGATAAAACGCATTTGTGAAACAGAATTGGGAATAGTGTCTCAATGCTCTCAGCCCAAGGAAGCTGTAAGGCTACAGAAGCAATATCTTGAAAATTTGGCTCTCAAGATCAATGTTAAGGTTGGGGGGCGCAATTCGGTGTTGATTGATGCACTTCTGAGGAAAATTCCTCATGTGACTGATCGTCCTACTATAATATTTGGTGCGGATGTAACACATCCTCAGCCAGGGGAGGACTCGAGTCCTTCTATAGCAGCGGTTGTAGCATCCATGGATTGGCCTGAGGTCACTATGTACCGTGGAATTGTTTCTGCCCAAGCGCACCGTGAAGAAATTATACTTGATCTCCATAAAACTCAGGATCCCAAGAGGGGAATGATTAGAGAGCTACTTGTTGCATTCTATAAATCAACCAAATTTAAACCAGACAGGATTATATTCTACAGAGATGGAGTTAGTGAAGGCCAATTCAGTCAGGTTCTACTTCATGAAATGGAAGCTATAAGAAAGGCTTGTGCCTCCTTACAGGAAGGATATATGCCAAGAGTAACTTTCTTGGTGGTACAGAAAAGACATCACACTCGATTCTTTCCTGTTGATCATAGCAGTCGCGATCAAACTGATAAAAGTGGAAATATTTTGCCAGGCACTGTTGTTGATACTCGTATTTGTCATCCTAGAGAATTTGACTTTTATCTCAACAGTCATGCTGGCATTAAGGGAACTAGCCGACCTACGCATTATCATGTACTGTATGATGAAAACAACTTCAAGGCTGATGAGTTGCAGACTTTAACAAACAACTTGTGTTACACGTATGCAAGGTGCACTAGATCGGTGTCCATAGTTCCTCCTGCTTATTATGCCCATTTGGCAGCTTTCCGTGCTCGCTACTACATTGAAGGCGAGACATCGGATTTGGATTCTGGAAGTGGAAGTAGGAGCACTAACTTTGTGGTAACTCTTCCGGAAATCAAGGACAATGTCAAGGATGTTATGTTTTACTGCTAA 2502 0.4392 MPRRVGRKQPEVRPLQPSLDPSQSAPGQNVARGVSQGGPGRGAPSVSIASAPPTSAITTDAPPGNELAQLTLQSPAPSSSKALRFADRPDFGKMGKKIQVRANHFLVDVADKDLHHYDVSISPEITSKQINRNVMNQLIQLYRESHLDKRIPAYDGRKSLFTAGPLPFLSKEFVVKLVDSDEHGSSSASTKSKREREFKVTIRYASKADLHHLQQFLRCRQLDNPQETIQALDVVLRASPSAKYTVVGRSFFSPSLGQTGGLESRFTLDDKRTSVVQYFREKYNVELKYLSLPALQAGNDTKPIYMPMELCKIAAGQRYSKKLNERQVTALLRATCQRPYDREKDIREMARHNNFNRDKIVHEFGIKVSEELAVCDARVLPPPRLKYHETGKEPVVEPMRGQWNMINKKMINGGNVQYWSCVSFSTRVSRDLPHQFCNELVNMCTSKGMVFNRTPLLPIRSAPPSQIEGVLRDVYKHSDKKLQLLIIILPDIKGSYAKIKRICETELGIVSQCSQPKEAVRLQKQYLENLALKINVKVGGRNSVLIDALLRKIPHVTDRPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEVTMYRGIVSAQAHREEIILDLHKTQDPKRGMIRELLVAFYKSTKFKPDRIIFYRDGVSEGQFSQVLLHEMEAIRKACASLQEGYMPRVTFLVVQKRHHTRFFPVDHSSRDQTDKSGNILPGTVVDTRICHPREFDFYLNSHAGIKGTSRPTHYHVLYDENNFKADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSDLDSGSGSRSTNFVVTLPEIKDNVKDVMFYC 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1117 833 Pfam Argonaute linker 2 domain 341 387 IPR032472 -
Lele09g1117 833 ProSiteProfiles Piwi domain profile. 484 798 IPR003165 GO:0003676
Lele09g1117 833 SUPERFAMILY Ribonuclease H-like 476 798 IPR012337 -
Lele09g1117 833 MobiDBLite consensus disorder prediction 1 64 - -
Lele09g1117 833 Pfam PAZ domain 263 331 IPR003100 GO:0005515
Lele09g1117 833 MobiDBLite consensus disorder prediction 48 64 - -
Lele09g1117 833 CDD Piwi_ago-like 359 797 IPR045246 -
Lele09g1117 833 Pfam Mid domain of argonaute 398 476 IPR032473 -
Lele09g1117 833 Gene3D paz domain 193 319 - -
Lele09g1117 833 MobiDBLite consensus disorder prediction 16 31 - -
Lele09g1117 833 Gene3D - 379 546 - -
Lele09g1117 833 Pfam Piwi domain 486 797 IPR003165 GO:0003676
Lele09g1117 833 ProSiteProfiles PAZ domain profile. 263 315 IPR003100 GO:0005515
Lele09g1117 833 FunFam protein argonaute 10-like 552 833 - -
Lele09g1117 833 FunFam Argonaute 10 379 546 - -
Lele09g1117 833 Pfam N-terminal domain of argonaute 96 236 IPR032474 -
Lele09g1117 833 SUPERFAMILY PAZ domain 214 356 IPR036085 GO:0005515
Lele09g1117 833 Gene3D - 553 833 IPR036397 GO:0003676
Lele09g1117 833 SMART Piwi_a_2 484 798 IPR003165 GO:0003676
Lele09g1117 833 CDD PAZ_argonaute_like 263 314 - -
Lele09g1117 833 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 266 799 - -
Lele09g1117 833 SMART PAZ_2_a_3 207 335 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1117 Lele-ChrLele09 20325004 20330441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1117 232 833 Eukaryotic Initiation Factors Gene Family AT1G48410 60.348 0.0 768