Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1114 ATGGCTTTCCCTTGGTCCCGCTTGCTTCTTTCTCGCTCTTCACCCTCCAACTACTCCATCTTCTCCGATCTTACCCTAGCTCGCTCTGGTGACTTGGTATGTCCCACATTTTCTGCTTTAGTCCACCGAAGCAACATCTACGTTGAGCCTCCATTTACTCCTCTCACAATCAAGCTTTTGACTCCCAGAATCCAAGTTCAATACTGCGCCAAATCCACGGGGGAGGAGCAGTGGACTTCGGCGGAAACTGCCTTATCTTCTTCTGGTGAAGCCAGGCATGGGGAGACAAATGAGGCTCAGAGATCGGTCGCCACCACGTCAGGCGATTTTTCCCCTCTTGGAATTCGAGAACCAGTTTATGAGGTTTTGGAGGTGAAGTCTAATGGAACGGTATCAACTAGAACAATCAACAGAAGACAGCTATTGAAGTCAAGTGGTCTACGTCCACGAGATGTTCGAAGTGTGGATCCATCATTGTTTATGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGCATGCTATTCTTCTAAATTTGGGTTCATTACGAGCAATAGCAATGCAAGAGAGTCTGCTTATATTTAACTATAACTGTAAAGGAGGGAAAGCTTTTTTAGAGTCATTACTGCCTCGGTTAAACCCTAAGAACAACAACGGAGGACCATCCATGCCATTTGAGCTCGAGGTTGTTGAAGCAGCACTGCTTTCAAGAATACAGCATTTAGAGCAGAAAATGATGCACTTAGAACCTCGTGTCCAAGCTCTTCTTGAGGTCTTGCCAAACCGATTGACTGGCAATATATTAGAGGAACTTCGTATCAGCAAACAAACTTTGGTTGAGTTGGGTTCAAGGGCAGGAGATCTCAGACAAATGCTGCTTGCCCTTCTGGAGGACCCTCTTGAAATACAACGTATATGTATTATGGGAAGAAACTGCACACTTAAGAAAGGACACGACAATGTAGAATGCTCAGTGGCCTCAGATAAGCAGATTGCTGAGGAGGAAGAGGAGGAAATTGAGATGCTTTTGGAAAATTACCTTCAAAGATGTGAATCTTGCCATGGCCAAGCTGAAAGGCTTCTAGATTCCGCGAAAGAAATGGAAGATTCTATATCTGTCAGTTTAAGCTCAAGGAGGCTTGAGGTTAGCAGAGTGGAACTACTTCTCCAGGTTGGAGCATTCTGTTTGGCAGTTGGTGCCCTTATAACAGGTATTTTTGGCATGAATCTGAAGTCCCATCTTGAAGAACGTGTGGTATTTTGCATTTTGGCTGACAACAGCTGGGATTATAGTCGGTGCAGTTGTAGCCTTCTTTCTCATGTATTCCTATCTCAAGACAAGGAAAATATTTTGATTCCAACAGACTTCAAAATTAGGTGA 1380 0.4428 MAFPWSRLLLSRSSPSNYSIFSDLTLARSGDLVCPTFSALVHRSNIYVEPPFTPLTIKLLTPRIQVQYCAKSTGEEQWTSAETALSSSGEARHGETNEAQRSVATTSGDFSPLGIREPVYEVLEVKSNGTVSTRTINRRQLLKSSGLRPRDVRSVDPSLFMTNSMPSLLVREHAILLNLGSLRAIAMQESLLIFNYNCKGGKAFLESLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQHLEQKMMHLEPRVQALLEVLPNRLTGNILEELRISKQTLVELGSRAGDLRQMLLALLEDPLEIQRICIMGRNCTLKKGHDNVECSVASDKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSISVSLSSRRLEVSRVELLLQVGAFCLAVGALITGIFGMNLKSHLEERVVFCILADNSWDYSRCSCSLLSHVFLSQDKENILIPTDFKIR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1114 459 CDD Mrs2_Mfm1p-like 122 416 IPR039204 -
Lele09g1114 459 Gene3D Magnesium transport protein CorA, transmembrane region 197 380 - -
Lele09g1114 459 Coils Coil 325 349 - -
Lele09g1114 459 MobiDBLite consensus disorder prediction 79 110 - -
Lele09g1114 459 FunFam Magnesium transporter MRS2-11, chloroplastic 198 380 - -
Lele09g1114 459 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 96 417 IPR039204 -
Lele09g1114 459 MobiDBLite consensus disorder prediction 79 109 - -
Lele09g1114 459 FunFam Magnesium transporter MRS2-11, chloroplastic 115 196 - -
Lele09g1114 459 Gene3D - 116 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1114 Lele-ChrLele09 20293586 20298444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1114 113 447 MRS2 Gene Family AT5G22830 75.821 1.44e-170 485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1114 09 20293586 20298444 Lele11g1114 11 18401150 18406273 hybridization
Lele09g1114 09 20293586 20298444 Lele12g0208 12 1678822 1681535 hybridization