Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1108 ATGGCGTTTTGTTCATCCGCCTTCAATATCTCAAACATCCACAACTTTTCAAACGCCTGCGCTTCCACCGGGCAATATGCCTTCAAACTTCCACTTGAAATCAAAAGTTGTGGTTGTTTGAATATCACAAACTTGGATCAAAGGAGCCACATGTCCTCATCTCTTTATATTCATTCACCTGACAAAAGACGTGGTTTCAGCATTCGATGTGTCCGATCAGAAGCCGTGACGAAGACCATCACTGAATTGGATGAGTCCAAATTTGATAATGGCTGTGAACCCTTAATTGATCGGGATGGTGGGGATGGAGGTGGTTCTGGTGACGGTAGTGGAGGGACTGGTGGCGGCGGCAGCGGTAATAGGGACGATGGTAGAGATGAAGATGAGGAAGAGTTCGGTCCGTTATTGAAGTTTGTGGATGTTATGAAAGTCACAGAAGATCGGGGATTGAAGCTTCCTTCGGATATGGCGGAGGCAGCGAAGACAACAGGAATTCGGGAAATGTTCCTTCTTCGTTACTTGGAATTACAGGGTTCGGCTTGGCCACTGGGTTTTTTGATGAAGCATTGTTCTATGCTTCGAAACCGAATGTTAGCTGATCCTTCTTTTCTATTTAAAGTTGGAACAGAGATTGCTATAGATTCTTGTTGTGCAACATTTGCTGAAGTTCAGAAAAGAGGCAAGGATTTTTGGGCAGAATTTGAGTTGTATGCAGCCGATCTTCTGGTTGGTGTGGTTGTTGACATTGCTTTAGTTGGCATGTTGGCACCCTATGCTCGACTTGGGAAGCCATCAACGTCGAGAGGTTTGCTTGGACGCATTCAACATGCTTGCGCTGCTCTTCCTAGCAGTGTTTTTGAAGCTGAAAGGCCAGGCTGTAAATTCTCAATGATGCAACGCATTGCAACATACTTTTATAAGGGTGCATTGTATGGATCAGTTGGGTTTGGATGTGGACTAGTTGGTCAAGGAATTGCAAATATGATAATGAATGCCAAAAGGAGGATTAAGAAATCTGAAGAAGACATACCTGTGCCTCCTCTTGCTCAAAGTGCTGCTCTCTGGGGTGTGTTTCTTGCCGTGTCATCCAATACTCGATATCAAATTGTGAATGGACTAGAAGGCATTGTGGAAGCTTCTCCTGTGGCAAAGAAGCTTCCACTCTTCGCGATGATGTTCACGGTATGCGTGAGATTTGGCAACAACATATACGGCGGTATGCAGTTCGTAGACTGGGCCAAATGGAGTGGGGTGCAATAA 1260 0.4508 MAFCSSAFNISNIHNFSNACASTGQYAFKLPLEIKSCGCLNITNLDQRSHMSSSLYIHSPDKRRGFSIRCVRSEAVTKTITELDESKFDNGCEPLIDRDGGDGGGSGDGSGGTGGGGSGNRDDGRDEDEEEFGPLLKFVDVMKVTEDRGLKLPSDMAEAAKTTGIREMFLLRYLELQGSAWPLGFLMKHCSMLRNRMLADPSFLFKVGTEIAIDSCCATFAEVQKRGKDFWAEFELYAADLLVGVVVDIALVGMLAPYARLGKPSTSRGLLGRIQHACAALPSSVFEAERPGCKFSMMQRIATYFYKGALYGSVGFGCGLVGQGIANMIMNAKRRIKKSEEDIPVPPLAQSAALWGVFLAVSSNTRYQIVNGLEGIVEASPVAKKLPLFAMMFTVCVRFGNNIYGGMQFVDWAKWSGVQ 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1108 419 MobiDBLite consensus disorder prediction 94 129 - -
Lele09g1108 419 Pfam Protein RETICULATA-related 195 373 IPR021825 -
Lele09g1108 419 PANTHER EXPRESSED PROTEIN-RELATED 68 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1108 Lele-ChrLele09 20258469 20260839 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1108 09 20258469 20260839 Lele29g0314 29 1897110 1900429 CCT
Lele09g1108 09 20258469 20260839 Lele30g1094 30 14072131 14075434 CCT
Lele09g1108 09 20258469 20260839 Lele31g1232 31 18625617 18628947 CCT
Lele09g1108 09 20258469 20260839 Lele32g0299 32 1867474 1870803 CCT
Lele09g1108 09 20258469 20260839 Lele11g1109 11 18367555 18369934 hybridization
Lele09g1108 09 20258469 20260839 Lele12g0211 12 1742046 1744547 hybridization