Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1094 ATGGCAACACCAAAACAGCTATATGAACAGCACCAGCAGCAGAGAGTGAAGAACTCAGGAATCATTAGCACAAACCAGAGCCCAATTTGTGATGACAAAGAAGAGGAAATGGCAAGATCAGCTCTGGCCATGTTCCGAGCCAAGGAAGAAAAAATCGAGAAGAAGAAAATGGAGGTAAGGGACAAGGAGCTTGAGGGTATAACAGATCCAATGAGAAAAGAAGTCACAGTAGTTCGAAAGAAGATAGACACAGTGAACAAAGAGTTAAAGCCACTGGGCCAAACCTGCCAGAGAAAGGTGGGAAGGAACGACGCGTCAACGACGATGGACGCCTCCGAGGCGCTCGGAAATTCCAACCCTAGTGATGGAGCAAAAGCAAAGAAGCAGAAGGTGGTTGTGATAATGGGTCCCACTGGCTCTGGCAAGTCTAAGCTCGCCATTGATCTTGCTTGCCACTTCCCGGTCGAAGCTATCAACGCTGATTCCATGCAGGTTTACCGAGGCCTGGATGTTCTCACCAACAAAGTTCCACTCTCCGACCAAAAGGGGGTTCCTCACCATCTTCTGGGTACTATAAGCCCAAACGTGGAATTCACAGCTAAAGACTTTCGAGATTCTGCTATCCCTCTCATCGATGACATATCTGCTCGCAACTGCTTGCCTGTCATAGTTGGGGGTACGAATTATTTCATCCAGGCCCTCGTGAGTCCATTCCTTCTAGATGAGTCAGTTGAAGATATGGATGAAACCTGTACGGACAATCTTTCTGGTACTACGCCATTGGATAAGAGTTTCATCCCTGAAAGGGACAGTAATTATAATTTGCTTAAAGATATTGATCCACTTGCAGCAAATAGAATGCATCCAAATAACCTTAGAAAGATTAGTCAATACCTTAATTTGTATGCTCGCACCGGAGTTCTTCCGAGCAAAATTTTCCAGGGAAAAGTGGCAGAAGTTTGGCAGAAGTGGGGTCAAGTTGGTAACTCGAGATACGATTGCTGTTTTATATGTGTGGATGCATCTCTCCCTGTACTGGACAGATATGTAGAACAGAGGGTAGATTGCATGATGGATGCTGGATTACTTAATGAAGTCTATGACATTTACAATCCAAATGCTGTTTATAGTCGAGGCTTTCGGCAGGCAATTGGTGTCCGTGAATTTGAACCTCCTCTGAAAACCCTTGTAATCGAAGAAATCTACAAAAGAGAGAAAGTATTGGCTGAGGAATCCAGAAGAGAAAAGGGTGATAAATTGTCCAATGACGATCTGAGGGAGCTCTTGAAGTTGTCTTCTGACATGAAATCCATCACGCTTATGGAAGAAGCTATTGAAAAAGTAAAGGTTAACACCCGGAGACTAGTCCGCCGTCAGAAGAGGATGCTTAATCGGCTGCAAAAATTGTTTGATTGGACTATACACTACGTGGATTCAACAGAATCATTATCAAGTAAATCAGACGATATATGGACTGCTCAAGTGGTAGAACCTGCGGCGAAGATCGTTAGATCTTTCCTTGGTAATAACGAGAGCTTGCCATCCACGTCTGAAACTTCAAATAGCAGTGGGATGAAGATACTTCAAAGGGACCTATGGACTCAATACATATGCAAGGCCTGTGGAGATAGGGTGCTTAGAGGAATCCATGAATGGGAACAACACAAACAGGGTCGTGGACACCGCAAACGTATTTCTAGTCTCAATAACAAATCACAAGGTCTCTGTTCAGTGGATCAATAG 1743 0.4423 MATPKQLYEQHQQQRVKNSGIISTNQSPICDDKEEEMARSALAMFRAKEEKIEKKKMEVRDKELEGITDPMRKEVTVVRKKIDTVNKELKPLGQTCQRKVGRNDASTTMDASEALGNSNPSDGAKAKKQKVVVIMGPTGSGKSKLAIDLACHFPVEAINADSMQVYRGLDVLTNKVPLSDQKGVPHHLLGTISPNVEFTAKDFRDSAIPLIDDISARNCLPVIVGGTNYFIQALVSPFLLDESVEDMDETCTDNLSGTTPLDKSFIPERDSNYNLLKDIDPLAANRMHPNNLRKISQYLNLYARTGVLPSKIFQGKVAEVWQKWGQVGNSRYDCCFICVDASLPVLDRYVEQRVDCMMDAGLLNEVYDIYNPNAVYSRGFRQAIGVREFEPPLKTLVIEEIYKREKVLAEESRREKGDKLSNDDLRELLKLSSDMKSITLMEEAIEKVKVNTRRLVRRQKRMLNRLQKLFDWTIHYVDSTESLSSKSDDIWTAQVVEPAAKIVRSFLGNNESLPSTSETSNSSGMKILQRDLWTQYICKACGDRVLRGIHEWEQHKQGRGHRKRISSLNNKSQGLCSVDQ 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1094 580 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 128 507 IPR039657 -
Lele09g1094 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 468 IPR027417 -
Lele09g1094 580 Gene3D Classic Zinc Finger 532 574 - -
Lele09g1094 580 MobiDBLite consensus disorder prediction 1 28 - -
Lele09g1094 580 Gene3D - 267 316 - -
Lele09g1094 580 TIGRFAM miaA: tRNA dimethylallyltransferase 131 394 IPR018022 GO:0008033
Lele09g1094 580 MobiDBLite consensus disorder prediction 1 32 - -
Lele09g1094 580 Hamap tRNA dimethylallyltransferase [miaA]. 131 484 IPR018022 GO:0008033
Lele09g1094 580 Gene3D - 128 531 IPR027417 -
Lele09g1094 580 Pfam IPP transferase 164 461 - -
Lele09g1094 580 FunFam tRNA dimethylallyltransferase 531 574 - -
Lele09g1094 580 Pfam Transcriptional activator 17 62 IPR007033 -
Lele09g1094 580 Pfam Transcriptional activator 62 99 IPR007033 -
Lele09g1094 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 371 IPR027417 -
Lele09g1094 580 Coils Coil 45 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1094 Lele-ChrLele09 20108057 20114208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1094 119 570 C2H2 Transcription Factor Family AT2G27760 56.466 6.29e-173 496