Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1090 ATGAAGGTGATCGCTGCGTATTTGCTGGCTGTATTGGGAGGGAACGCAGCCCCTACTGCCGACGATCTGAAGAACATCCTTGGCTCAGTTGGAGCTGAGATTGATGATGAAAGGATTGAGTTGCTTTTGTCTGAAGTCACTGGTAAAGACATCACTGAGCTAATTGCTAGCGGAAGGGAGAAGTTGGCTTCAGTGCCCGGTGGCGGTGGTGCAGTTGCTGTTGCTGCTGCACCTGCAGCTGGTGCAGCTGCCGGTGGTGCTGCACCTGCTGCCGAGGCTAAGGAAGAAAAGAAGGTGGAAGAGAAGGAAGAATCCGATGATGACATGGGTTTTAGTTTATTCGACTGA 348 0.5172 MKVIAAYLLAVLGGNAAPTADDLKNILGSVGAEIDDERIELLLSEVTGKDITELIASGREKLASVPGGGGAVAVAAAPAAGAAAGGAAPAAEAKEEKKVEEKEESDDDMGFSLFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1090 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele09g1090 115 MobiDBLite consensus disorder prediction 91 105 - -
Lele09g1090 115 Pfam 60s Acidic ribosomal protein 18 114 - -
Lele09g1090 115 FunFam 60S acidic ribosomal protein P2 1 59 - -
Lele09g1090 115 MobiDBLite consensus disorder prediction 85 115 - -
Lele09g1090 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele09g1090 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lele09g1090 115 Gene3D - 1 59 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1090 Lele-ChrLele09 20073325 20074737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1090 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 69.565 2.77e-34 113