Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1074 ATGGATGAAGAACATCGATGCCAAGCTCCATGCCTTTGCGCTAACAACTGCGGCTTCTTTGGTAGCCCAGCGACGCAAAACCTATGTTCCAAATGCTACCGGGATTTGCAGCTCAAGGAACAACAATCCTCCTCTGCTAAATTGGTTCTCAACCAATCCCTTGCTCCTCCGTCTTCGACGACCACGCAATCGTCTTCTTCGCCTGAAATGATCGACGGAATTTCGTCGTCCTCTGCGGCATCCGATCCCCCGCGCACAGCGGACGAGGTCAAAAGTGGATCTTCGGCGCAGCCACCGGTTCAGCCGAGCCGGTGCATGACTTGCAGGAAGCGCGTGGGGCTCACGGGATTCAACTGCAGGTGCGGATCAACATTTTGCAGGTCTCACCGGTACCCGGAACAGCACGGATGTGAGTTCGACTTCAAGGGGATGGGTAGGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAGGGCGAAAAGCTCGAGAAGATCTGA 495 0.5556 MDEEHRCQAPCLCANNCGFFGSPATQNLCSKCYRDLQLKEQQSSSAKLVLNQSLAPPSSTTTQSSSSPEMIDGISSSSAASDPPRTADEVKSGSSAQPPVQPSRCMTCRKRVGLTGFNCRCGSTFCRSHRYPEQHGCEFDFKGMGREQIAKANPVVKGEKLEKI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1074 164 FunFam Zinc finger AN1-type containing 6 77 160 - -
Lele09g1074 164 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 164 - -
Lele09g1074 164 SMART AN1_Zf_4 105 142 IPR000058 GO:0008270
Lele09g1074 164 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Lele09g1074 164 MobiDBLite consensus disorder prediction 45 103 - -
Lele09g1074 164 Gene3D - 74 160 IPR035896 -
Lele09g1074 164 Pfam A20-like zinc finger 12 34 IPR002653 GO:0003677|GO:0008270
Lele09g1074 164 Gene3D - 1 69 - -
Lele09g1074 164 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Lele09g1074 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 60 - -
Lele09g1074 164 Pfam AN1-like Zinc finger 105 141 IPR000058 GO:0008270
Lele09g1074 164 ProSiteProfiles Zinc finger AN1-type profile. 99 145 IPR000058 GO:0008270
Lele09g1074 164 SUPERFAMILY AN1-like Zinc finger 91 159 IPR035896 -
Lele09g1074 164 MobiDBLite consensus disorder prediction 45 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1074 Lele-ChrLele09 19959317 19959811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1074 1 164 C2H2 Transcription Factor Family AT3G52800 52.353 2.11e-44 142