Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1071 ATGGATTTGAGGGAATATTACAGTGAACAAGACAGGAGTATGAACTTTCATGCTCCAACTTTCTTTGAATGGCTCAAACCATCTTCATATCCTCCTCCTCCTCCTTCATCTTCTGTGATTCATCAAGAAGAGACTATTCAGTTTTTGCCAATTTTAACTGAAAAGCCCTTAAAAGATCAGGAAGGCTATAGAACTATTGGCGTAATTAAAGAAGAGAAGGGCGACGACGAAGATGAGCAAGTGACTGTGGCTTTGCACATAGGATTACCTAATAGTACACAAGGTTTTGAGGTTGATGATGACGATGATCAGAAGAATAAGAAAGTTTTAGATGTGAAGGAAGAAGAAGAAGAAAAACAAGGGGTGAATAATAGAAGCTTTCAAGGGTTCTCTAAGAATTCTAACACGGAGAGAAGGTTCTGGATACCAACTCCAGCACAGATCCTTGTTGGGCCGATGCAGTTTACTTGCTCAATATGCAGCAAGACCTTCAATAGGTATAATAACTTGCAGTATAGAAAAGGATCAGAATCACTGAAAGGGACACAACCAGCAGCAATGTTGAGGCTGCCATGTTACTGTTGTGCACAAGGCTGCAAGAACAATATAAACCATCCAAGAGGCAAGCCTCTTAAGGACTTCAGAACCCTACAAACACACTTCAAGAGGAAGCATGGTTCTAAGCCTTTTGTCTGCAGAAAATGCGCCAAAACCTTCGCCGTTAAAGGAGATTGGAGGACTCACGAGAAGAACTGTGGCAAGTTCTGGTATTGTTCCTGCGGCTCTGATTTCAAGCACAAGAGATCTCTCAAAGATCATATCAGATCCTTTGGAAAAGGTCACTCCCCTTGTTTTGAAGATGATCACAACAAGGAATATTCCATCACTAGTAATACTACTGCCTCTCAAGAATGTTAA 918 0.4107 MDLREYYSEQDRSMNFHAPTFFEWLKPSSYPPPPPSSSVIHQEETIQFLPILTEKPLKDQEGYRTIGVIKEEKGDDEDEQVTVALHIGLPNSTQGFEVDDDDDQKNKKVLDVKEEEEEKQGVNNRSFQGFSKNSNTERRFWIPTPAQILVGPMQFTCSICSKTFNRYNNLQYRKGSESLKGTQPAAMLRLPCYCCAQGCKNNINHPRGKPLKDFRTLQTHFKRKHGSKPFVCRKCAKTFAVKGDWRTHEKNCGKFWYCSCGSDFKHKRSLKDHIRSFGKGHSPCFEDDHNKEYSITSNTTASQEC 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1071 305 FunFam Zinc finger protein WIP2 199 281 - -
Lele09g1071 305 PANTHER ZINC FINGER PROTEIN WIP2 29 291 IPR043584 GO:0003700|GO:0010468
Lele09g1071 305 SUPERFAMILY beta-beta-alpha zinc fingers 216 250 IPR036236 -
Lele09g1071 305 Gene3D Classic Zinc Finger 226 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1071 Lele-ChrLele09 19938073 19942169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1071 8 283 C2H2 Transcription Factor Family AT1G08290 51.376 3.82e-100 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele09g1071 None None None