Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1068 ATGCTAGTTTCCGAGACAGAAACGGTCGCTTCCGACAAGAGCCATATCCAACCGTTGGCATATTCGTCTCTATCCCTGCCTCTTCCACAATTGCATCATGAATCACCGTTAAAAGAGACCTCAATTTCTTCACCGAACAGTAGTCATCAAAATTCAATACTCCCTCTTACCCCTGAAGAAATCCAAATCAAGAGCGGAAGGATGTTTGGATCAATGAGCATGGACGAATTCCTAGCCAACATTTGGAATTCCGACGATAACCCGGTCAATTCGCAACCGCCACCGACGCCGCTGTCACCCGCCCGTGACGAATTGCTTGTTCAGAACAAAAACGGAGGTGCAGAAACAGAACCAGTTGTCTCCCAACAGGCCCCATTGTCTGTTCCTCCACCGATTTGCAAGAAAACTGTGGATGAGGTTTGGTCTGAGATCCGAAAAGATCACCGGCCGCAGCAAAATGAAGAAGCTAATGACGAAATTAGCGGCAGTGAGAACCTCAAAAGGCAACAAACACTTGGGGAAATGACTCTGGAGGATTTCCTGATAAAAGCTGGAGTAGTTCAAGAATCATCTTTACCGTCAATTATTCCCTTGAAGTCTTCTGGGCCTCAACAACAACCCCCACCACCACCATCTTCATCGTTGCCATTTCAGGTCCAAACTGGGAATATGACAGATAATGACAGACAATTCGATGCGTCTTACAAAATGGGGCCTGGAATGAGGATGGGATTTTCTACCCAACAAAATGTCGTCGGAGGCCGTTCGGCATCATCAGGAAATGGAACTGCAACTGCAACACACCGAGTGTTGTCGCAGAGTCATAGCTTAGCCGGAAAAGAGGACGCTACTGAGAAATGTCAGACATCAGGAGGAACTAGGAATAGCAACAAGAAGAGGATAATTGATGGCCCTCCTGAAGTGGTGGTGGAGAGAAGGCAGCGTAGGATGTTGAAGAATCGAGAATCAGCAGCACGTTCTCGAGCAAGAAGACAGGCATATACAGTGGAGTTAGAAGCAGGTCTGAATCAACTTAGACAAGAAAATGAAAAGCTGAAAGAAATTCTGGCTGAAGCTGAGCGGAAGAGAAAACAAGAGATAGCGCGGAAGAAGCATGCAACTATGGCACAGAAAAGAACAGAGAAGTTTAGAGCTCTAAGGAGGACAGTGAGCGCAGCCTGGACTTTCACGGCTGCTACTGAGTTGTTTATCTCAGCTCTGCCATATTTCTTAGCAATGGATGATATTATGAACGATGAAGCTACTCATTGTTCAGAGGAAACACAGAGAAGCTGCTGTGATGGAAAATATTCTTGGTTGAACATGGATGATGATGATGATGGTTATGGTGATTTAGCAGAGCATGATCTTATAGGCCTCCAAATACCAATGGATGACCTATCCCAGATTATCTGA 1416 0.4576 MLVSETETVASDKSHIQPLAYSSLSLPLPQLHHESPLKETSISSPNSSHQNSILPLTPEEIQIKSGRMFGSMSMDEFLANIWNSDDNPVNSQPPPTPLSPARDELLVQNKNGGAETEPVVSQQAPLSVPPPICKKTVDEVWSEIRKDHRPQQNEEANDEISGSENLKRQQTLGEMTLEDFLIKAGVVQESSLPSIIPLKSSGPQQQPPPPPSSSLPFQVQTGNMTDNDRQFDASYKMGPGMRMGFSTQQNVVGGRSASSGNGTATATHRVLSQSHSLAGKEDATEKCQTSGGTRNSNKKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAGLNQLRQENEKLKEILAEAERKRKQEIARKKHATMAQKRTEKFRALRRTVSAAWTFTAATELFISALPYFLAMDDIMNDEATHCSEETQRSCCDGKYSWLNMDDDDDGYGDLAEHDLIGLQIPMDDLSQII 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1068 471 Coils Coil 335 369 - -
Lele09g1068 471 SMART brlzneu 308 372 IPR004827 GO:0003700|GO:0006355
Lele09g1068 471 MobiDBLite consensus disorder prediction 243 278 - -
Lele09g1068 471 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 315 330 IPR004827 GO:0003700|GO:0006355
Lele09g1068 471 Gene3D - 310 366 - -
Lele09g1068 471 MobiDBLite consensus disorder prediction 146 166 - -
Lele09g1068 471 MobiDBLite consensus disorder prediction 216 230 - -
Lele09g1068 471 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 310 362 IPR004827 GO:0003700|GO:0006355
Lele09g1068 471 MobiDBLite consensus disorder prediction 195 305 - -
Lele09g1068 471 MobiDBLite consensus disorder prediction 31 53 - -
Lele09g1068 471 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 49 394 IPR043452 GO:0003700|GO:0045893
Lele09g1068 471 Pfam bZIP transcription factor 312 363 IPR004827 GO:0003700|GO:0006355
Lele09g1068 471 SUPERFAMILY Leucine zipper domain 312 357 IPR046347 GO:0003700|GO:0006355
Lele09g1068 471 MobiDBLite consensus disorder prediction 36 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1068 Lele-ChrLele09 19889449 19895931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1068 50 394 bZIP Transcription Factor Family AT3G44460 43.213 1.75e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele09g1068 bZIP_1 8e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1068 09 19889449 19895931 Lele29g0351 29 2151639 2154472 CCT
Lele09g1068 09 19889449 19895931 Lele30g1056 30 13830253 13833099 CCT
Lele09g1068 09 19889449 19895931 Lele31g1189 31 18331239 18334125 CCT
Lele09g1068 09 19889449 19895931 Lele32g0336 32 2100170 2102960 CCT
Lele09g1068 09 19889449 19895931 Lele11g1071 11 17964910 17970883 hybridization