Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1067 ATGACTTCTTTCTGGGAAAAGGCAAGAGAATGGTCTGAAGAGCTTTGCATGGCGACCCACAGAATGGGAGAAACTGGTTTATCTGAGTCAGGACCTTCAACTTCAAGTCACCATGTTCCATATGGGCCTCTTCATGGGATTACTTCTCCTTCATCCGGCTTAATCAATCAAGGATCTGGTTTTTACTTTGGAGGATTGGAAGAGGCAATTCTGCAAGGAATGAAGATTAGGAATGAAGAAACCAAAGCCTCTTTATTCACAGGCAAGCCTGCAGCTACACTAGAAATGTTCCCTTCATGGCCCATGAGATTCCAGCACAACCCAAGAGATCAAGGTGGTTCAAAATCTGGAGGAGAGAGCACTGATGATGATTCAGGATCAGGACTGAATACTACTATTTCAAGCAAAACAGAAGCACAGTTTGAACCAGAATCTGAATCTCCCATAAGTAATAAAGCATCTTGTTCAGATTATCATCAGGCTTTTGATCAGCATCAGAAACTGCAGCAGCTACAGCAACTAGAACAGGAGATGGCAAGTGATACCTCACGATGCCAAACACTGAATCAGAATCAGAATCAGAATCAATCAGCTCCTAAACCATTTCAGGCAAAGAGGAAGGGAGGAGGTTCTACATCAGAGAAGCAACTTGATCCAAAGACATTGAGGCGTCTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGAAAAAAGGCTTACGTGCAGCAGTTAGAGTCAAGTAGAATAAAGCTTTCCGAGCTTGAACAAGAGCTTCAAAGAGCACGCTCTCAGGGACTATTGGTGGGCTGTGGTGGGACTACTACTGCTAGCACCGATATGAGTTCCGGTGCAGCAATATTTGACATGGAATATAGGAGATGGTTGGAAGAAGACCAGCGGCAGATGGAGGAGCTGCGGCGGAGCTTGGAGGCGGCGGTGCCGGACAATGAACTGAGAGGGATGGTGGAGAATTATCTGAGACACTACGACGAGATCTTTGAACTGAAGGGAGGGGCAGCAAAATCAGATGTATTTCACGTCATGAACGGAACGTGGACCACCCCCGCCGAGCGATGCTTCCTCTGGATCGCCGGCTTCAGACCCTCCGATCTCATCGGGATGTTGATACAGCAGTTAGAGCCGGTGGCGGAGCACCAAATACTGGGGATGTATGAGCTGAGGCAGTCGACACAGCAAGCGGAGGAAGCTCTGAGTCAAGGGCTCGATCAGCTTCAGCATTCTCTCCTTCACACCGTCGTTGGAGGCCTCACCGTTGACGGCGTTCACCAGATGTTTCTCGCCATGACCAAGCTTTCCAATCTCGAAGCCTTTATCCGCCAGGCTGATAATTTGAGACAGCAAACACTTCACCAGTTGTGTCGACTACTAACAGTTCGTCAAGCAGCAAGATGTTTTCTTGTGATCGGAGAGTACTATGGTCGTCTTCGAGCTCTTAGTTCCCTTTGGGCATCACGACCACGAGAGGCATTGATCAACGATGAGACATGCCACCAAATAGCAACAAACATGCCAATAGTTCAATCTTCCCAGAATCATTTCTCGACCTTCTGA 1578 0.4772 MTSFWEKAREWSEELCMATHRMGETGLSESGPSTSSHHVPYGPLHGITSPSSGLINQGSGFYFGGLEEAILQGMKIRNEETKASLFTGKPAATLEMFPSWPMRFQHNPRDQGGSKSGGESTDDDSGSGLNTTISSKTEAQFEPESESPISNKASCSDYHQAFDQHQKLQQLQQLEQEMASDTSRCQTLNQNQNQNQSAPKPFQAKRKGGGSTSEKQLDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLSELEQELQRARSQGLLVGCGGTTTASTDMSSGAAIFDMEYRRWLEEDQRQMEELRRSLEAAVPDNELRGMVENYLRHYDEIFELKGGAAKSDVFHVMNGTWTTPAERCFLWIAGFRPSDLIGMLIQQLEPVAEHQILGMYELRQSTQQAEEALSQGLDQLQHSLLHTVVGGLTVDGVHQMFLAMTKLSNLEAFIRQADNLRQQTLHQLCRLLTVRQAARCFLVIGEYYGRLRALSSLWASRPREALINDETCHQIATNMPIVQSSQNHFSTF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1067 525 Coils Coil 171 191 - -
Lele09g1067 525 FunFam BZIP family transcription factor 219 268 - -
Lele09g1067 525 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 262 IPR004827 GO:0003700|GO:0006355
Lele09g1067 525 SUPERFAMILY Leucine zipper domain 220 262 IPR046347 GO:0003700|GO:0006355
Lele09g1067 525 MobiDBLite consensus disorder prediction 175 222 - -
Lele09g1067 525 Pfam bZIP transcription factor 220 260 IPR004827 GO:0003700|GO:0006355
Lele09g1067 525 CDD bZIP_HBP1b-like 220 271 - -
Lele09g1067 525 PANTHER TRANSCRIPTION FACTOR TGA9 164 497 - -
Lele09g1067 525 MobiDBLite consensus disorder prediction 109 153 - -
Lele09g1067 525 SMART brlzneu 216 281 IPR004827 GO:0003700|GO:0006355
Lele09g1067 525 ProSiteProfiles DOG1 domain profile. 286 494 IPR025422 GO:0006351|GO:0043565
Lele09g1067 525 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
Lele09g1067 525 Gene3D - 219 268 - -
Lele09g1067 525 MobiDBLite consensus disorder prediction 175 201 - -
Lele09g1067 525 MobiDBLite consensus disorder prediction 102 153 - -
Lele09g1067 525 Pfam Seed dormancy control 303 377 IPR025422 GO:0006351|GO:0043565
Lele09g1067 525 Coils Coil 239 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1067 Lele-ChrLele09 19878233 19884201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1067 199 525 bZIP Transcription Factor Family AT1G08320 67.683 9.59e-159 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele09g1067 DOG1 6.7e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1067 09 19878233 19884201 Lele11g1070 11 17950104 17954235 hybridization
Lele09g1067 09 19878233 19884201 Lele12g0245 12 2163328 2167282 hybridization