Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1064 ATGGCGGGAAGACAACTAGAAATTGGGAATTCAGACTCCGGATTATATATAGAGCTTCGAGATCGAATATCGTCAGTCGAGGTCGTAGTTAGCCATTTTTCGCAGAGAATGGGAGAGACAGAGAAGGTGGTGCCGGAGGCGGAGGAGCTACCCAAGGCTATAGTGCGCCGGGTGGTGAAAGACGAGCTCTCACGGTGCCCCGACGACGGAGACATTTCGATTCACAAAGATGCCCTTCTCGCTTTCTCTGAAAGCGCGCGGATCTTTATACACTACCTTTCCGCAACGGCCAACGACATATGCAAGGAAGCAAAGAGGCAGATAATAAGCGCCGATGATGTATTTAAGGCTCTTGAAGAGACTGAGTATTCCGAGTTTGTCGGGCCCCTAAAAGCTTCTCTTGAAGAGTTTAGGAAGAAGAATGCTGGAAAGAAAGCAGGTGCGTCAAAGGAAAACGATGAGAAGAAGAAAAGAAAGTTAGTAGATGAGCCATCTGATAAAGACGAGGGTGGTGACAACAAATGA 525 0.4781 MAGRQLEIGNSDSGLYIELRDRISSVEVVVSHFSQRMGETEKVVPEAEELPKAIVRRVVKDELSRCPDDGDISIHKDALLAFSESARIFIHYLSATANDICKEAKRQIISADDVFKALEETEYSEFVGPLKASLEEFRKKNAGKKAGASKENDEKKKRKLVDEPSDKDEGGDNK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1064 174 Gene3D Histone, subunit A 41 174 IPR009072 GO:0046982
Lele09g1064 174 FunFam DNA polymerase epsilon subunit 3 42 174 - -
Lele09g1064 174 MobiDBLite consensus disorder prediction 141 174 - -
Lele09g1064 174 SUPERFAMILY Histone-fold 50 155 IPR009072 GO:0046982
Lele09g1064 174 Coils Coil 101 121 - -
Lele09g1064 174 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 49 118 IPR003958 -
Lele09g1064 174 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 44 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1064 Lele-ChrLele09 19852504 19854014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1064 50 154 CCAAT-HAP3 Transcription Factor Family AT4G14540 32.381 3.73e-11 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele09g1064 CBFD_NFYB_HMF 4.9e-09 CL0012