Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1057 ATGGCCGACGTGGTTTCCAGGGAGGCTCAGATGTCCATCGCTGCTTCTTCTATGTTTCCTGGTTTCAGGTTCTGTCCTACCGACGAAGAGCTGATTTCCTATTATCTCCGGAAGAAATTAGAAGGCCATGAAGAGAGCGTTCAAGTTATTTCTGAGCTTGAGATTTGCAAATTTGAGCCTTGGGATTTACCAGCCAAATCATTCATTCAATCAGATAACGAGTGGTTCTTCTTCTCTCCTCGTGGAAGAAAGTACCCAAATGGATCACAAAGTAAGAGGGCAACCGAATGTGGCTATTGGAAAGCCACTGGCAAAGAGCGAAACGTAAAGTCAGGTTCTAATGTTATAGGCACCAAACGAACTTTGGTATTCCATATGGGTCGTGCCCCAAAAGGCGGTAGAACAGAATGGATTATGCACGAGTATTGCATCAACGACAAATCCCAGGATTCTTTAGTTTTGTGTCGGCTAAAGAGGAACACAGAGTTTCGTCAGAACGATGCTTCAAACAGAGCATCTTCAAGTCAACAGCAGGCAGGGAATTCTCATGAAAGTAACTGCGCTATCTCCGAAGCTGAGATAGATCAAACGGGCGTATGCGAACAAGATAAAGGCGTTGGATGCAGTTCAAAGCGCAGCAGTTCCAGTTACGATTCTCCATTAACGGAGCAAATTGATTCTGCCTCTGAATCCAATCAAAGAACAACCAACTATGACGCTGCTGGGACGACGGGATCTTCCAGTCACCAAAAGGAGGTGGATGAAGAGGATTGTTATGCTGAGATACTGAAGAATGATATCATCAAATTGGATGAATCTTCATTGCCGTCGCAAGAGGCTCACGCGATAAGATCGCAGGATCCTCCTCAGGCACTACCATTCCAAGGCACAGCTCAACGAAGAATTAGATTAAAGGTAGATAAATCAAGGAGTCGTGCTGCTGCAGGACTTGGTTTTGCAAGCTCAAAGCGCCCATCCAAGAATACCACCACCCTCTTTGGTATATTGACAAATCTAGTGCTGTTATGTGTTTGCTTCGTTTTAACTTTGATAGCCCTTTATTGGTCCTTAATGGGTTCTGAAAAGCTGCGACAGATTTGGTTCCTTGTGTAG 1113 0.4474 MADVVSREAQMSIAASSMFPGFRFCPTDEELISYYLRKKLEGHEESVQVISELEICKFEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHMGRAPKGGRTEWIMHEYCINDKSQDSLVLCRLKRNTEFRQNDASNRASSSQQQAGNSHESNCAISEAEIDQTGVCEQDKGVGCSSKRSSSSYDSPLTEQIDSASESNQRTTNYDAAGTTGSSSHQKEVDEEDCYAEILKNDIIKLDESSLPSQEAHAIRSQDPPQALPFQGTAQRRIRLKVDKSRSRAAAGLGFASSKRPSKNTTTLFGILTNLVLLCVCFVLTLIALYWSLMGSEKLRQIWFLV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1057 370 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Lele09g1057 370 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 232 - -
Lele09g1057 370 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Lele09g1057 370 SUPERFAMILY NAC domain 9 159 IPR036093 GO:0003677|GO:0006355
Lele09g1057 370 MobiDBLite consensus disorder prediction 207 248 - -
Lele09g1057 370 Gene3D NAC domain 27 165 IPR036093 GO:0003677|GO:0006355
Lele09g1057 370 MobiDBLite consensus disorder prediction 202 253 - -
Lele09g1057 370 MobiDBLite consensus disorder prediction 166 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1057 Lele-ChrLele09 19814911 19816552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1057 5 288 NAC Transcription Factor Family AT2G27300 52.817 7.94e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele09g1057 NAM 9.2e-35 No_clan