Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1055 ATGCCCACACACAGATACGTTTCAATGGAAGATCTTCCTCCTGGTTTTCGCTTCTACCCTACAGAGGAAGAACTCGTGGCTTTCTACCTCCATAACAAGCTTCAAGGTGGACGACGCAGCGACCACATAAACAGAGTCATCCCTGACATTGCCATTTATGATTTTGAGCCCTCCCAGCTTCCCAAGCTTGCGGGAGAGTTGTGTCGTGGAGATACAGAGCAATGGTTCTACTTCTCGGCGAGACAAGAGAGAGAAGCCAGAGGAGGCAGACCAAACAGAACCACGGCTTCTGGGTATTGGAAAGCCACTGGATCTCCGGGCTACATTTACTCTTCTGATAACAAAGTCATAGGGTTGAAGAAAACCATGGTTTATTACAAAGGCAAAGCTCCTTCTGGAAGGAAAACCAAGTGGAAGATGAACGACTACAAAGCCATTGAATTCTCTCCCCAATCCTCCTCCATCGCCACTCCGAAGTTGAGGCATGAATTCAGCTTGTGCCGGGTTTACGTGATATCCGGAAGCTTTCGAGCATTTGATCGCCGTCCTTTAGCTTCTTCTTCAACAAGTGGGCACGATGAGAATTTAAGGGTGGATGAATCAAAGTCACACACAGTCCCAGATGGTGGAGGATCAAGTCGTGCGAACCAGAGTGTAAATAATGAGGAAGAAGAAGCTATGTGGGAATGGGAACACTTTACGACTTTTGATGCTTCTGTTAATTATGACTCAAATCCTTGA 741 0.4669 MPTHRYVSMEDLPPGFRFYPTEEELVAFYLHNKLQGGRRSDHINRVIPDIAIYDFEPSQLPKLAGELCRGDTEQWFYFSARQEREARGGRPNRTTASGYWKATGSPGYIYSSDNKVIGLKKTMVYYKGKAPSGRKTKWKMNDYKAIEFSPQSSSIATPKLRHEFSLCRVYVISGSFRAFDRRPLASSSTSGHDENLRVDESKSHTVPDGGGSSRANQSVNNEEEEAMWEWEHFTTFDASVNYDSNP 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1055 246 Gene3D NAC domain 21 175 IPR036093 GO:0003677|GO:0006355
Lele09g1055 246 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 195 - -
Lele09g1055 246 MobiDBLite consensus disorder prediction 183 225 - -
Lele09g1055 246 Pfam No apical meristem (NAM) protein 13 144 IPR003441 GO:0003677|GO:0006355
Lele09g1055 246 MobiDBLite consensus disorder prediction 206 223 - -
Lele09g1055 246 ProSiteProfiles NAC domain profile. 12 172 IPR003441 GO:0003677|GO:0006355
Lele09g1055 246 SUPERFAMILY NAC domain 6 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1055 Lele-ChrLele09 19791163 19792097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1055 10 234 NAC Transcription Factor Family AT5G22380 54.430 2.79e-88 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele09g1055 NAM 1.8e-28 No_clan