Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1051 ATGACTGAGTCCAAGAATGCAAATCGCAAATTTGTTGAGACCATTGAGCTCCAGATTGGTCTGAAGAACTATGATCCACAAAAGGATAAGCGTTTCAGTGGATCTGTGAAGTTGCCCCACATCCCTCGCCCTAAGATGAAAATATGCATGCTTGGAGATGCCCAACATGTTGAAGAGGCTGAGAAGATTGGTTTGGACTGGATGGATGTAGAAGCATTGAAGAAGCTAAACAAGAACAAGAAATTGGTTAAAAGGCTAGCCAAAAAATACCATGCCTTTTTAGCATCTGAAGCTGTCATTAAGCAGATTCCTCGTCTTTTGGGTCCAGGTCTTAACAAGGCAGGGAAATTCCCCACACTTGTTACTCACCAAGAATCCCTTGAGTCAAAGGTTAATGAAACCAAGGCCATGGTGAAATTTCAGCTAAAGAAGGTTTTGTGCATGGGAGTTGCTGTAGGAAATGTTAGTATGGAGGAAAAGCAGATCTTCCAAAATGTGCAACTCAGCGTTAACTTCCTTGTCTCCTTGTTGAAAAAGAATTGGCAGAATGTTCGGTGCTTGTATCTGAAGAGCACCATGGGGAAATCAAACCGTGTCTTTTGA 603 0.4229 MTESKNANRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDWMDVEALKKLNKNKKLVKRLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSNRVF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1051 200 FunFam Ribosomal protein 121 198 - -
Lele09g1051 200 ProSitePatterns Ribosomal protein L1 signature. 100 119 IPR023673 -
Lele09g1051 200 FunFam Ribosomal protein L10a 1 103 - -
Lele09g1051 200 SUPERFAMILY Ribosomal protein L1 6 200 IPR023674 -
Lele09g1051 200 Pfam Ribosomal protein L1p/L10e family 5 194 IPR028364 -
Lele09g1051 200 CDD Ribosomal_L1 3 199 IPR028364 -
Lele09g1051 200 FunFam Ribosomal protein 49 138 - -
Lele09g1051 200 Gene3D - 5 195 - -
Lele09g1051 200 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 6 194 - -
Lele09g1051 200 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 2 200 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Lele09g1051 200 Gene3D - 49 138 IPR016095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1051 Lele-ChrLele09 19765671 19766977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1051 4 200 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 90.355 4.34e-119 335