Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1046 ATGGCCTGCCGGATACTGGTCGCCGGGAACTTGGATCCAGAGAGAAAGAGGTGTGGGGGCTTGAGGACTAAGCAAGCGGGAAGAGGATCCTTTTTCGTCGTTTTGAATCCCGTCATTGAAACCATGGGCTTTTTGTTGAAACAAGTTCTCAAGACCCTCTGCAGTGGGAATCAATGGTCTTACGCTGTCTTCTGGAAGATCGGATGCCATAACCCCAAGCTGTTAATTTGGGAAGATTGCTATTATGCACCCTTGCCTTGTCAATTTCCTAGGGGCATCGCTGGAACAGAGACTTCTAATTTGCCTTTTGTGAGTGGGGAAGGCTTCCGGCGTTCTTCTGATTCTCATTCTTGTAAGATAGGAACTCAAGAAGAGGACAGAGTCTGCGCTTTGATTAACAAAATGATGGTGAATAATTCGGTCAATGTCATAGGTGAAGGGATTATTGGGCGGGCTGCATTTACAGGAAACCACCAGTGGATTCATTTGAACAATTTTAGAAGAGATGCATATCCGCTGGAGGTGTACAATGAGGTGCATCTCCAGTTTTCAGCTGGAATGCAGACAGTAGCAGTTATTCCTGCGCTTCCTTATGGCGTTGTTCAAGTTGGTTCTTTCTTGCCAATAATGGAGAACATGGGAATAGTGAATGAAGTGAAGAGCTTTACTATGCAATTGGGGTGTGTCCCTGGTGCTCTTCCATCTGAAGACTTTTCCGAAAAGGCTTCTCTCGAAAGATTTGGTAATCCTGTTACTGTTGGAATTCCTGTGTCTGTTGATCCACCAGTAGTTACCCCCAGTCCCACACCCGCAGTAACTTACGGCTTCAACCAAGAAATCAATTTGTCTTGTACTTCAAGGCCTATTGTTCAACCAGCTCATCCTCTTAAAGGAGAGATAAATAATCATCAGGGTTCTGTATTGACACATCAAACCCCTAATATTACTCAGATATTATCCAATTACCGCGATAATCTTTGTGAACCTTCAGCAATACCAGTGATGAACCCAAATTTTGATGTCCAGCCTGAGAATTTAGTTATGGAGGCAGAGGTGATGCCCTTGAATCTTGATTCATGTCTGCCACAACAGTCTGCCTCATTGAGTGCTAGATCTGCATCCAATAAATTGACTGACTTGAGCCAATCCGGTCTGGTTGACTGCGGCATAAAAGTTAAGGAACAAGAAAAGTTGTTTAGCTGTAGGAGTCAAAGTTATCTTAATCCAAATTTGACTGTATCAAATACATCGTCTCAACTGAAAAATAGTGGAGGCCATGTACTTGATCACAGTCAGATTACTATTAGTTCTTCATCAATTCATGGTGGAACGAGCAGACTTTTGAGGTCAAATCTCATTGCCAGCTCTGTTTCTAATCCTTCTAAAGTTGCCACTGCGGATTTTTGTGAAACCAGGAAAGCTGGACCTGGGCTTCAAAATGATGGTTTAACAAAAGGAGGGCGCTACTCTCTGCCTAACTTAACCAGTCAATCTGGTACTAGTCCTATGCCTCTAGAAGGTTTGGATCAGAACAATATTCCTGTAGATTTAAAGCATGCTCATGATAAATTGGCTCCAACAGGCCAAAGAATGGATGATGATCTGCTTCAGGCCATTAAGACCCCATATCTTCAGCAGGTGTCTATGAAGGATCACATCCCTGCTTGTCTTCTACCTCCATCAAGTGATGACCTATTTGATGTTTTAGGTGTGGATCTTAAAAACAAACTACTGAATGAAAACTGGAATAAGTTGCTTGCAAAAGAATCGAATGCTGGTGCTGAAATTCTGCAAAACAAGGAAACATGTTTGAGCATGCAGGATATGGATCCTGATGTTTATTCAATTAATGAAGCCATTTCAGACAGTGGAGTCTTCTCTGAGAGAGGCAACAACCATCTCCTGGATGCCGTGGTCCCAAGGGCAAAGTCTATTGGGAAACAGGATTCTGATGATATGTCTTGTTGGACAACTTTGACTAGGACTAGTAATGCTTCTGTTCGCTCTCCTGCTTATCGGAAGGTTATGTCTGATCATGCTCATGGTGGATTCTCTGGTTTTCCTAAAGATGCGATTAAAGCAGGTTCTGCAGAAACTAGTTCTCTTAGGTCTGGATGTAGCAGGGATGATGCTCGAAGCTGTTCTCAAACTACTTCCATTTATGGGTCTCAACTTAGCTCATGGGTTGAGAATGCTACAAATGTGAAGTGTGAAAATAGTGTCTCAACTGGATTCTCTAAGCGGCCTGATGAAGTTTGTAAGTCAAATCGTAAAAGGCTTAAGCCTGGGGATAACCCCAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGCTACGAGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGACGCACTTCTTGAACGTACGATCAAGCACATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTAAAACAAACCGGCGAATCTAAGATTATGAGTAAGGAAGGTGGACTGCTTTTAAAAGACAATTTTGAGGGAGGGGCTACTTGGGCATATGAGATTGGCTCACAATCAAGGGTTTGCCCCATCGTAGTAGAGGATCTGAATCCCCCTCGTCAGATGTTAGTGGAGATGCTGTGTGAAGAAAGAGGTTTCTTTCTGGAAATAGTTGACTTAATCCGAGGATTGGGGTTGACCATATTGAAGGGGGTGATGGAAACCCGAAATGACAAGATCTGGGCATGCTTTGCTGTAGAGGCAAATCGGGACGTAACGAGGATCGAGATATTCATGTCTCTGGTTCATCTTTTGGAGCAAACAGGAAAGGGAACTGTATCTTCAGCCAACCCTATATGTCAGTCCTTCCCTCAAGCCACCCAGATAGCGGCAACCGGCGGACCTAGTAGTATGCAATGA 2904 0.4356 MACRILVAGNLDPERKRCGGLRTKQAGRGSFFVVLNPVIETMGFLLKQVLKTLCSGNQWSYAVFWKIGCHNPKLLIWEDCYYAPLPCQFPRGIAGTETSNLPFVSGEGFRRSSDSHSCKIGTQEEDRVCALINKMMVNNSVNVIGEGIIGRAAFTGNHQWIHLNNFRRDAYPLEVYNEVHLQFSAGMQTVAVIPALPYGVVQVGSFLPIMENMGIVNEVKSFTMQLGCVPGALPSEDFSEKASLERFGNPVTVGIPVSVDPPVVTPSPTPAVTYGFNQEINLSCTSRPIVQPAHPLKGEINNHQGSVLTHQTPNITQILSNYRDNLCEPSAIPVMNPNFDVQPENLVMEAEVMPLNLDSCLPQQSASLSARSASNKLTDLSQSGLVDCGIKVKEQEKLFSCRSQSYLNPNLTVSNTSSQLKNSGGHVLDHSQITISSSSIHGGTSRLLRSNLIASSVSNPSKVATADFCETRKAGPGLQNDGLTKGGRYSLPNLTSQSGTSPMPLEGLDQNNIPVDLKHAHDKLAPTGQRMDDDLLQAIKTPYLQQVSMKDHIPACLLPPSSDDLFDVLGVDLKNKLLNENWNKLLAKESNAGAEILQNKETCLSMQDMDPDVYSINEAISDSGVFSERGNNHLLDAVVPRAKSIGKQDSDDMSCWTTLTRTSNASVRSPAYRKVMSDHAHGGFSGFPKDAIKAGSAETSSLRSGCSRDDARSCSQTTSIYGSQLSSWVENATNVKCENSVSTGFSKRPDEVCKSNRKRLKPGDNPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIMSKEGGLLLKDNFEGGATWAYEIGSQSRVCPIVVEDLNPPRQMLVEMLCEERGFFLEIVDLIRGLGLTILKGVMETRNDKIWACFAVEANRDVTRIEIFMSLVHLLEQTGKGTVSSANPICQSFPQATQIAATGGPSSMQ 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1046 967 CDD bHLH_AtLHW_like 764 833 - -
Lele09g1046 967 MobiDBLite consensus disorder prediction 740 775 - -
Lele09g1046 967 MobiDBLite consensus disorder prediction 476 505 - -
Lele09g1046 967 MobiDBLite consensus disorder prediction 750 775 - -
Lele09g1046 967 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 760 809 IPR011598 GO:0046983
Lele09g1046 967 MobiDBLite consensus disorder prediction 489 505 - -
Lele09g1046 967 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 42 958 IPR043561 GO:0003700|GO:0006355
Lele09g1046 967 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 46 221 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1046 Lele-ChrLele09 19714650 19719873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1046 562 938 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.569 7.19e-115 365
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1046 09 19714650 19719873 Lele11g1046 11 17746112 17751099 hybridization
Lele09g1046 09 19714650 19719873 Lele12g0277 12 2373484 2378430 hybridization