Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1043 ATGGGGACGTTCTTTCATGGAGGCAATTCAGAAATCCAATCTTCTCGTGCTTCTGCCGCTGCCTCCGGTGGCGGTGATGGCTTCCACACACTTTACCTTCTCAACCCCAGCAGCACCACCCCGTATGTTCCCTACTCCGATACAAGCCCCAACCCTCAACCGACGCCCAACATGCTTCTTCTCAATCCCAATTCTCCCCCGAACGCGCTCAACCTCGCCCCCCTCTCCCACGCGCCCCCTACTTCCTCCTCCAACCATAACCCTGACGATCCCACCCGTCCCTCCTTTCTTGGACATGAAATCTCCGCCTTCCATGGCTTCACCGCCGCGGCGGCTGCTCCTCCTCCGCATGTCCACTACAACCTCTGGGGTTCAATGATTGATCCTCACCCAACATCAGCCGTGCCAACCGCGTCTAGCAGTTCTGGTGGAGGTCCCTCCGCCTCCGCCACCGCCACCCTAGACGTGTCGCCACATATGAATTTCAGGAGGCCTACTCATCGGCAGGGTCTGTCGCTGAGCCTTTCATCTCAACAGACAGCTTATAGGTCACTTTCCGGCGAGCTGGACGTTCCTGGGCAACCTCAAGCTGCTGCTGTCATACCAACCTCGAACGACGACGATGTGCGGATTCTGGTTCCAAGTAATCATCATCATGCTTCGTCGAATGGAATTTCAAGTGTTCAGAGTTTCGTTTTAGGATCCAAGTATTTGAGAGCAGCTCAGGAGGTTTTGGATGAAGTTGTTAATGTGGGTAATAAGGGAATCAACCAAGAGGAAGGGGCCATGAAAGAGAAGACGAAAGCGAATAAAGAATCAACATCTGGTTGGAATCGCGACGGTTCAAATGGCGGTGGCGGTGGCGGAGAAGGAGGAGAAAATAGTGGAAATGGCAAGCAAGGACAAGGAGGTGAACTCAGTACAGCACAAAGACAAGAACTTCAGATGAAGAAGTCCAAGCTTGTCACCATACTTGATGAGGTGGAACAAAGGTACAGACAATATCACCACCAAATGCAGATAGTGATAGCATCGTTCGAGCAAGCTGCTGGATATGGAGCAGCGAAAACATACACATCACTTGCCCTAAAGACGATCTCGAAGCAATTTCGATGTCTCAGAGACGCAATCGCTTCACAAATACGTGCCACTAGCAAGACCATGGGGGAAGATGATTGCTTGGGAGTTAAGGTAGAAGGTTCCAGGCTGAGGTTTGTGGACCATCATCTTCGCCAACAAAGGGCTTTACAGCAACTTGGAATGATTCACCACAATGCTTGGAGACCCCAAAGAGGCTTGCCTGAACGAGCCGTCTCCATTCTCCGTGCTTGGCTCTTCGAGCATTTTCTTCACCCCTACCCAAAGGACTCCGATAAAGTTATGCTTGCAAAACAAACTGGACTTACTCGTAGCCAGGTGTCAAACTGGTTCATAAATGCTCGAGTTCGGCTATGGAAACCAATGGTGGAAGAAATGTACATGGAAGAAATGAAAGATCAAGAAGGGAACAATAATAATAATAATAAGGAGGTGGGGTCATCAAGCACTAAGGATAATTCACAGCCACAAGATCATCATCAGATGAATAGCTTCCAATCAAATAATCCAGATCAAAGCTTCAACAACCAAACAACCGACATCTCAAATTCCTCAATCTACCTTCATCGTCCTCATCATTCTTCATCAGGATTCCCAGGATCGTCGTCTCATCATCATCATCATCATGACATGCAAATAAGAACGAGTCCCAAGAAGCCAAGAAGTTCAGAAGTAATGAACAATTCTCCGAGCAGTATCCTGTCGGTGGACATGGAAATGAAGCCGGGAGATCATAACACAGACAGATCAGAAGGCAACACTACAAATTTTGGCATGATAATTAGTAGTAATCATGGGAATGATCATGGAGGAGCCGGAGGAGGAGTAGGATATGGAGGGTTCACCATGGAAGACATGGGAAGGTATAACATGGCAGCTGACCAATTAGCTCCAAGGTTCCATGGAAACGGCGTGTCGCTTACTCTTGGACTTCCCCACAGCAATGATAATAATAACCTTCCTGGCCATGGATTTCTGTCGCACAACATGAACTTGACGGCGGATGGAACCGAGTTCTGCGCGATCAACGCTCCGCCTCCGTCTCATTCCAACACAAGTTATGAGAATATTGATCACATTCAGAACAGAAAGAGGTTTGCTGCCAAGTTATTGCCAGATTTTGTGGCCTGA 2229 0.4863 MGTFFHGGNSEIQSSRASAAASGGGDGFHTLYLLNPSSTTPYVPYSDTSPNPQPTPNMLLLNPNSPPNALNLAPLSHAPPTSSSNHNPDDPTRPSFLGHEISAFHGFTAAAAAPPPHVHYNLWGSMIDPHPTSAVPTASSSSGGGPSASATATLDVSPHMNFRRPTHRQGLSLSLSSQQTAYRSLSGELDVPGQPQAAAVIPTSNDDDVRILVPSNHHHASSNGISSVQSFVLGSKYLRAAQEVLDEVVNVGNKGINQEEGAMKEKTKANKESTSGWNRDGSNGGGGGGEGGENSGNGKQGQGGELSTAQRQELQMKKSKLVTILDEVEQRYRQYHHQMQIVIASFEQAAGYGAAKTYTSLALKTISKQFRCLRDAIASQIRATSKTMGEDDCLGVKVEGSRLRFVDHHLRQQRALQQLGMIHHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKDQEGNNNNNNKEVGSSSTKDNSQPQDHHQMNSFQSNNPDQSFNNQTTDISNSSIYLHRPHHSSSGFPGSSSHHHHHHDMQIRTSPKKPRSSEVMNNSPSSILSVDMEMKPGDHNTDRSEGNTTNFGMIISSNHGNDHGGAGGGVGYGGFTMEDMGRYNMAADQLAPRFHGNGVSLTLGLPHSNDNNNLPGHGFLSHNMNLTADGTEFCAINAPPPSHSNTSYENIDHIQNRKRFAAKLLPDFVA 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1043 742 MobiDBLite consensus disorder prediction 40 98 - -
Lele09g1043 742 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 139 513 - -
Lele09g1043 742 MobiDBLite consensus disorder prediction 499 567 - -
Lele09g1043 742 MobiDBLite consensus disorder prediction 584 601 - -
Lele09g1043 742 MobiDBLite consensus disorder prediction 1 23 - -
Lele09g1043 742 CDD homeodomain 427 487 IPR001356 GO:0003677
Lele09g1043 742 SUPERFAMILY Homeodomain-like 428 494 IPR009057 -
Lele09g1043 742 MobiDBLite consensus disorder prediction 62 91 - -
Lele09g1043 742 FunFam BEL1-like homeodomain protein 9 430 492 - -
Lele09g1043 742 ProSiteProfiles 'Homeobox' domain profile. 424 487 IPR001356 GO:0003677
Lele09g1043 742 MobiDBLite consensus disorder prediction 1 20 - -
Lele09g1043 742 MobiDBLite consensus disorder prediction 132 153 - -
Lele09g1043 742 SMART HOX_1 427 491 IPR001356 GO:0003677
Lele09g1043 742 MobiDBLite consensus disorder prediction 259 273 - -
Lele09g1043 742 MobiDBLite consensus disorder prediction 259 310 - -
Lele09g1043 742 Gene3D - 423 502 - -
Lele09g1043 742 MobiDBLite consensus disorder prediction 498 619 - -
Lele09g1043 742 Coils Coil 311 331 - -
Lele09g1043 742 SMART prehox3 226 379 IPR006563 -
Lele09g1043 742 MobiDBLite consensus disorder prediction 47 61 - -
Lele09g1043 742 MobiDBLite consensus disorder prediction 295 310 - -
Lele09g1043 742 Pfam Homeobox KN domain 444 483 IPR008422 GO:0003677|GO:0006355
Lele09g1043 742 Pfam Associated with HOX 232 378 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1043 Lele-ChrLele09 19650438 19653823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1043 1 742 Homeobox Transcription Factor Family AT2G35940 39.721 1.13e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele09g1043 POX 1.3e-48 No_clan