Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1039 ATGGGAGAGACAAACCCTACCGCTGATGAGGACTTACTTCTCAAGAACTTCTTCGCCGAAGTCAGCGAAGTTGAGCGGGACAACGAAGTCGCTAGGATTCTCTCTTGTTTTAAGCTGAACCCATTTGAGCATCTAAAGCTTCCATTTGATTCATCACTTGATGATGTCAAAAAGCAGTACCGCAAGTTGTCATTGATGGTTCACCCTGATAAATGCAAGCATCCACAAGCGAAGGAAGCCTTTGGAGCATTAGCAAAAGCTCAGCAATTGTTACTTGATCAAAATGAAAGAGATTACATTATCAGCCAAGTTAACTCAGCAAAAGAGGAGCTTAGAGCCAAGAGGAAAAAGCAATTGAAGAAAGATACTGCTTCAAAAATCAAGTCTTTGGTAGAAGAGGGAAAATATGATCAACAATACGAACGATCTGAGGAATTCCATCAGGAGCTTAGAATCAAGGTCCGTGAGCTATTAACAGAACAAGAATGGAGGAGAAGAAAAATGCAAATGAGGATATCAGAGGAGGAAGGCAGACTAAAACGGGAAGAAGAGGAACAGAAGGAGATGTGGAAAAGAAAGCGTGAACATGAGGAGCAGTGGGAAGGAACGAGGGAACAAAGGGTATCCAGTTGGAGAGATTTTATGAAGGCCGGGAAGAAGGGTAAGAAAGGAGAGATTCGCCCTCCAAAGCTCAAGACCGAAGATCCCAACAAATCCTACGTTCAGAGGCCTGTGAAGCGAGGTTAG 747 0.4351 MGETNPTADEDLLLKNFFAEVSEVERDNEVARILSCFKLNPFEHLKLPFDSSLDDVKKQYRKLSLMVHPDKCKHPQAKEAFGALAKAQQLLLDQNERDYIISQVNSAKEELRAKRKKQLKKDTASKIKSLVEEGKYDQQYERSEEFHQELRIKVRELLTEQEWRRRKMQMRISEEEGRLKREEEEQKEMWKRKREHEEQWEGTREQRVSSWRDFMKAGKKGKKGEIRPPKLKTEDPNKSYVQRPVKRG 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1039 248 CDD DnaJ 40 93 IPR001623 -
Lele09g1039 248 PRINTS DnaJ domain signature 42 60 IPR001623 -
Lele09g1039 248 PRINTS DnaJ domain signature 76 96 IPR001623 -
Lele09g1039 248 PRINTS DnaJ domain signature 60 75 IPR001623 -
Lele09g1039 248 ProSiteProfiles dnaJ domain profile. 40 96 IPR001623 -
Lele09g1039 248 Pfam DnaJ domain 41 97 IPR001623 -
Lele09g1039 248 Gene3D DnaJ domain 18 101 IPR036869 -
Lele09g1039 248 SMART dnaj_3 39 96 IPR001623 -
Lele09g1039 248 Coils Coil 101 121 - -
Lele09g1039 248 PANTHER J DOMAIN-CONTAINING PROTEIN SPF31 2 248 - -
Lele09g1039 248 SUPERFAMILY Chaperone J-domain 37 98 IPR036869 -
Lele09g1039 248 MobiDBLite consensus disorder prediction 174 248 - -
Lele09g1039 248 Coils Coil 165 199 - -
Lele09g1039 248 MobiDBLite consensus disorder prediction 174 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1039 Lele-ChrLele09 19568285 19571390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1039 19 99 Miscellaneous Gene Families AT1G16680 40.230 3.40e-06 45.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1039 09 19568285 19571390 Lele29g0404 29 2443016 2448690 CCT
Lele09g1039 09 19568285 19571390 Lele30g1006 30 13526029 13531348 CCT
Lele09g1039 09 19568285 19571390 Lele31g1139 31 18036311 18041910 CCT
Lele09g1039 09 19568285 19571390 Lele32g0385 32 2386235 2391359 CCT
Lele09g1039 09 19568285 19571390 Lele11g1040 11 17592610 17595727 hybridization
Lele09g1039 09 19568285 19571390 Lele12g0284 12 2547020 2550255 hybridization