Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1037 ATGGATGTCGATTCCTCGATGGCCCCGGAAAGCGATCACGATCGTGCCGTGCAAAATCATACTTCTGGTCAGGCTCCGGAAACTATAGATAGAGAGCAGCCAGGAGAGGAGCCGTCGTTCGAAGGCGGGTCTCAGGCACAGTCGCCAGGGCAGCAGCAACAACAACAGCAAGCGGCTGCTCAGGTGCAGCAGAATCCTGTTGTTGGACCTAGGCTGGCGCCAACTTACACTGTCGTGAATGCAATCTTAGAAAAGGAGGAGGATGGGCCAGGGCCGAGGTGCGGCCATACTTTGACGGCGGTGGCAGCTGTTGGAGAGGAGGGTACACCTGGATGCATTGGTCCGAGGCTGATTTTGTTTGGTGGTGCCACTGCACTTGAAGGGAATTCTGCGGCTGCCGGGACTCCTTCATCTGCTGGGAATGCTGGCATACGTTTAGCTGGTGCCACGGCTGATGTACACTGCTATGATGTCTTGACTAACAAATGGTCTAGGATAACTCCCTATGGAGAACCTCCAACCCCAAGGGCTGCACATGTTGCAACTGCTGTAGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAACGGCCACGATGGCACAGAGTTGTTGTTCAAGGCCCTGGACCAGGGCCACGTTATGGACATGTGATGGCTTTGGTGGGGCAGAGGTATCTTATGGCAATTGGAGGAAATGATGGAAAAAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTACGAATGGCATAAGTTGGAGCCAGAAGGAGAAGGCCCACCCCCATGCATGTATGCAACTGCTAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGAAGGGACACCAATAGTGTGCCACTGGCTAGTGCATATGGACTTGCGAAGCATAGGGATGGTCGATGGGAATGGGCAATTGCCCCTGGTGTTTCACCATCTCCAAGATATCAGCACGCAGCAGTATTCGTTAATGCAAGGCTGCATGTGTCTGGAGGAGCTCTTGGTGGCGGGCGCATGGTAGAAGACTCATCAAGTGTGGCAGTGTTGGATACTGCTGCTGGTGTTTGGTGTGATACCAAATCTGTTGTCACCAGTCCAAGGACTGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTTGAATTGACAAGGCGTTGTAGGCATGCTGTTGCTGCCATTGGTGACCTTATATTTATTTACGGCGGTTTACGTGGCGGAGTATTGCTCGATGACCTACTTGTTGCTGAAGATCTCGCTGCTGCTGAAACAACAAATGCTGCTTCGCATGCTGCTGCATATAATGTACAAGCAGGACGATTACCTGGGCGATATGGATTTGTCGATGATAGGGACAGGCAAACAATGTCTGAAGCAACTGCTGATGGTTCAGTTGTTCTGGGAAATCCTGTGGCTCCCCCTATAAATGGTGACATTTATGCTGATATCAGCACTGAGAATGCCATGCTCCAGGGAACCCGGAGGACTAACAAAGGTGTTGAGTATCTTGTTGAAGCATCAGCAGCAGAAGCTGAAGCTATAAGTGCCACATTAGCTGCTGCTAAAGCACGTCAAGAGAACGGAGAAGTTGAATTACCTGACAGAGACCGTGGGGCTGAGGCTACCCCTAGTGGGAAACCAATATCTTCCCTGATTAGGCCTGAATTAGCAGACCCAAATAATATTGTTCCTGGTGGAGTTCGACTGCATCATAGAGCTGTTGTCATAGCTGCAGAGACTGGTGGAGCATTAGGTGGTATGGTTAGACAGCTTTCAATTGATCAGTTTGAAAATGAAGGCAGACGAGTCAGTTATGGAACTCCAGAAAGTGCAACTGCAGCTAGAAAATTATTAGATCGGCAGATGTCCATCAGTAGTGTTCCAAAGAAGGTCATAGCTCACCTATTAAAACCTCGAGGCTGGAAACCACCAGTTCGCCGGCAGTTTTTTTTAGATTGCAATGAAATTGCAGATCTTTGTGATAGCGCAGAGCGGATATTTTCAAGTGAACCAACTGTTTTGCAACTTAAGGCACCAATTAAAATATTTGGTGATTTACATGGGCAATTTGGGGATCTGATGCGTCTCTTTGATGAATATGGTGCACCATCAACTGCTGGTGACATAGCATACATCGATTATCTATTCCTAGGAGATTATGTTGACCGGGGTCAACACAGCCTGGAAACAATAAACCTTCTACTTGCTCTGAAGGTTGAATATCCCAACAATGTACACTTGATACGTGGAAATCATGAAGCTGCGGATATTAATGCCCTTTTTGGTTTCAGAATTGAGTGTATTGAGAGGATGGGCGAGAGAGATGGAATTTGGGCATGGCATCGGATTAATCGTTTGTTTAATTGGCTTCCCCTGGCGGCCTTAATTGAGAAAAAGATTATTTGCATGCATGGTGGTATTGGTCGTTCTATAAATCACGTGGAACAGATTGAGAATCTTCAGCGTCCAATCACAATGGAAGCCGGGTCAATTGTGCTGATGGATCTATTATGGTCTGATCCTACAGAGAATGACAGTGTAGAAGGACTGCGGCCAAATGCTAGGGGTCCAGGGTTGGTTACTTTTGGGCCTGACCGTGTCATGGAATTCTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCCCATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCTCAGGGACATTTGATTACTCTATTCTCAGCTACAAATTATTGTGGTACTGCAAATAATGCTGGGGCGATATTAGTCTTGGGCAGAGATCTTGTGGTGGTTCCTAAATTGATTCATCCATTACCACCTGCACTTTCCCCGGAAGCATCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAATAGACCACCGACTCCAACTAGAGGTCGTCCTCAAGTTGCTAATGATCGAGGTTCACTTGCTTGGATATGA 3009 0.4796 MDVDSSMAPESDHDRAVQNHTSGQAPETIDREQPGEEPSFEGGSQAQSPGQQQQQQQAAAQVQQNPVVGPRLAPTYTVVNAILEKEEDGPGPRCGHTLTAVAAVGEEGTPGCIGPRLILFGGATALEGNSAAAGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWHKLEPEGEGPPPCMYATASARSDGLLLLCGGRDTNSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAVAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTNAASHAAAYNVQAGRLPGRYGFVDDRDRQTMSEATADGSVVLGNPVAPPINGDIYADISTENAMLQGTRRTNKGVEYLVEASAAEAEAISATLAAAKARQENGEVELPDRDRGAEATPSGKPISSLIRPELADPNNIVPGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSISSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETINLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSPEASPERHIEDTWMQELNANRPPTPTRGRPQVANDRGSLAWI 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1037 1002 MobiDBLite consensus disorder prediction 40 64 - -
Lele09g1037 1002 MobiDBLite consensus disorder prediction 546 574 - -
Lele09g1037 1002 Pfam Calcineurin-like phosphoesterase 700 907 IPR004843 GO:0016787
Lele09g1037 1002 Pfam Kelch motif 334 380 IPR011498 GO:0005515
Lele09g1037 1002 MobiDBLite consensus disorder prediction 1 64 - -
Lele09g1037 1002 Gene3D - 272 461 IPR015915 GO:0005515
Lele09g1037 1002 Gene3D - 50 271 IPR015915 GO:0005515
Lele09g1037 1002 SMART pp2a_7 672 956 IPR006186 GO:0016787
Lele09g1037 1002 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1002 - -
Lele09g1037 1002 PRINTS Serine/threonine phosphatase family signature 918 934 IPR006186 GO:0016787
Lele09g1037 1002 PRINTS Serine/threonine phosphatase family signature 896 916 IPR006186 GO:0016787
Lele09g1037 1002 PRINTS Serine/threonine phosphatase family signature 735 762 IPR006186 GO:0016787
Lele09g1037 1002 PRINTS Serine/threonine phosphatase family signature 806 832 IPR006186 GO:0016787
Lele09g1037 1002 PRINTS Serine/threonine phosphatase family signature 768 792 IPR006186 GO:0016787
Lele09g1037 1002 PRINTS Serine/threonine phosphatase family signature 836 863 IPR006186 GO:0016787
Lele09g1037 1002 PRINTS Serine/threonine phosphatase family signature 700 727 IPR006186 GO:0016787
Lele09g1037 1002 ProSitePatterns Serine/threonine specific protein phosphatases signature. 769 774 IPR006186 GO:0016787
Lele09g1037 1002 MobiDBLite consensus disorder prediction 1 17 - -
Lele09g1037 1002 SUPERFAMILY Kelch motif 147 437 IPR015915 GO:0005515
Lele09g1037 1002 CDD MPP_Bsu1_C 652 954 IPR041758 -
Lele09g1037 1002 FunFam Serine/threonine-protein phosphatase 72 269 - -
Lele09g1037 1002 FunFam Serine/threonine-protein phosphatase 636 975 - -
Lele09g1037 1002 SUPERFAMILY Metallo-dependent phosphatases 657 957 IPR029052 -
Lele09g1037 1002 FunFam Serine/threonine-protein phosphatase 317 460 - -
Lele09g1037 1002 Gene3D - 637 976 IPR029052 -
Lele09g1037 1002 MobiDBLite consensus disorder prediction 978 1002 - -
Lele09g1037 1002 MobiDBLite consensus disorder prediction 548 562 - -
Lele09g1037 1002 PIRSF STPPP_BSU1 33 1002 IPR012391 GO:0004721|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1037 Lele-ChrLele09 19557237 19566928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1037 664 899 Calmodulin-binding Proteins AT5G63870 29.044 8.56e-26 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1037 09 19557237 19566928 Lele29g0406 29 2472671 2475994 CCT
Lele09g1037 09 19557237 19566928 Lele30g1005 30 13494812 13499343 CCT
Lele09g1037 09 19557237 19566928 Lele31g1138 31 18009092 18012393 CCT
Lele09g1037 09 19557237 19566928 Lele32g0387 32 2420167 2423686 CCT
Lele31g1147 31 18094050 18094715 Lele09g1037 09 19557237 19566928 CCT
Lele32g0374 32 2328510 2329175 Lele09g1037 09 19557237 19566928 CCT
Lele09g1037 09 19557237 19566928 Lele11g1039 11 17576480 17591225 hybridization