Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1033 ATGGATCCCTTAATCCGCAAGCTGCGCCGCCGCCTCCTTGCATGGTTTCACCGATCTCGCTCTGATCAAATATACTTTATGAGGCGACTTTCATACAAGGATGTTAAAAGAGCAACGGATGATTTTCACAGAATTATCTATAGCAATTCTCAAGTTGCTGCATATACGGCCAAATTTGAAGATGGTAGCGTTTCTTTGGTGAAAGAAATAAAGGATTTTGATCAAGCAGATGACATTTTCTGCAGCGAAGTGCAATTCTTGGGCCGCTTGCATCATCGACACCTTTTGTCACTCAAAGGATTTTCCTTGAAACATAAGAGATTGCTCATTTTTGACAGCATAGAGAATGGAAGCTTAAAGGATCATCTAAATGATCCCCTGAAGACACCCTTAAATTGGAGGACAAGGTTACAGATAGCTATTGGTGTTGTGGCAGCCCTGGAATACTTGTTTCTCTTCGTTGAACAACCATTATGTCATGTCTCCATCAGCTCTAGCAATGTCATGTTAGATGATAATTTTACAGCTAAACTATCTGATTTTGGCCTTCTTACTTGTGTTGGAAACCCCTTTATGATGCCAAATTCAAAAGATGACAGCATGAGGCAGAAAAGTGGTAACATAATATTCCAATTGGGAGTTTTCATACTGGAGCTTGTCACTGGTCAATCTTCAGAGATGGAAGGTTCAGATATAATAGAATGGATCCAGGAATCACGCTTCTACAGTTCCATTGATAAGATGGTTGACCCGGATCTTGGCGCCAATTACGATTCTAGTGAGATGAAAACCCTTCTAGCTGTTGCAAAGTTATGTATCAAATCAAGGGACAAGCCTGTATTTACAATCTCCCAGTTATTTAGGTATCTTCAACAGAAAATAGATATTCCTCGTGACTAA 900 0.4 MDPLIRKLRRRLLAWFHRSRSDQIYFMRRLSYKDVKRATDDFHRIIYSNSQVAAYTAKFEDGSVSLVKEIKDFDQADDIFCSEVQFLGRLHHRHLLSLKGFSLKHKRLLIFDSIENGSLKDHLNDPLKTPLNWRTRLQIAIGVVAALEYLFLFVEQPLCHVSISSSNVMLDDNFTAKLSDFGLLTCVGNPFMMPNSKDDSMRQKSGNIIFQLGVFILELVTGQSSEMEGSDIIEWIQESRFYSSIDKMVDPDLGANYDSSEMKTLLAVAKLCIKSRDKPVFTISQLFRYLQQKIDIPRD 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1033 299 ProSiteProfiles Protein kinase domain profile. 32 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g1033 299 SUPERFAMILY Protein kinase-like (PK-like) 23 266 IPR011009 -
Lele09g1033 299 Gene3D Phosphorylase Kinase; domain 1 13 112 - -
Lele09g1033 299 FunFam probable receptor-like protein kinase At1g49730 209 298 - -
Lele09g1033 299 FunFam Protein kinase superfamily protein 16 112 - -
Lele09g1033 299 PANTHER OS01G0253100 PROTEIN 25 294 IPR045271 -
Lele09g1033 299 Pfam Protein tyrosine and serine/threonine kinase 66 187 IPR001245 GO:0004672|GO:0006468
Lele09g1033 299 Gene3D Transferase(Phosphotransferase) domain 1 114 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1033 Lele-ChrLele09 19512196 19514863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1033 25 295 Receptor kinase-like Gene Family AT3G19300 37.201 1.80e-59 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lele09g1033 PK_Tyr_Ser-Thr 9.9e-17 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1033 09 19512196 19514863 Lele11g1035 11 17538916 17541568 hybridization
Lele09g1033 09 19512196 19514863 Lele12g0291 12 2610717 2614329 hybridization