Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1030 ATGGATATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATCCTAGCGGTAAGTGTTCCAAGCAGTAGTTTCCTTACCATAGTGACGGTTCGATGTGGGCATTGTGCTAATTTACTGTCAGTCAACATGGGAGCTTCTCTTCAAACATTCCCTCCTCAAGAGCTTCAGTTACAGAAACAGCAGCTAAGCTTTGAAGAATCAAGCAACAGAGAAGAGGGATCATCATCTTCAAAATACAGCAGATTTGCTGCATTTGAGTCTGCAGAGCATGAAAAACATAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAACGAGTTCCTTCTGCTTATAACAGGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCAGATATCAGCCACAGGGAGGCGTTTAGCACAGCGGCCAAAAACTGGGCACATTTTCCTCATATTCACTTTGGATTAAAGCTGGACGGCAACAAGAAAGGAAAGTTGGACCAGGAAGAAGGGACTCAAAAATCTAATGGCCTTTATTGA 537 0.4395 MDMMATERVCYVHCNFCNTILAVSVPSSSFLTIVTVRCGHCANLLSVNMGASLQTFPPQELQLQKQQLSFEESSNREEGSSSSKYSRFAAFESAEHEKHRIPPIRPPEKRQRVPSAYNREEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKLDQEEGTQKSNGLY 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1030 178 PANTHER PROTEIN YABBY 6-RELATED 5 164 IPR006780 GO:0007275
Lele09g1030 178 MobiDBLite consensus disorder prediction 92 115 - -
Lele09g1030 178 MobiDBLite consensus disorder prediction 157 178 - -
Lele09g1030 178 MobiDBLite consensus disorder prediction 67 86 - -
Lele09g1030 178 Pfam YABBY protein 5 155 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1030 Lele-ChrLele09 19490362 19496287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1030 4 178 C2C2-YABBY Transcription Factor Family AT1G08465 64.641 1.19e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele09g1030 YABBY 4.7e-67 CL0114