Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1005 ATGGAACACTTTATGGCTGTGCCTCGAATAATTTGGATTTGGATAATCCTTTGTGGTAGTCTTGCTTGTTGCCAAAGGCCAGCGTTTGTAAATATTGGCGCGGTTTTCACGTTTGATTCGGTCATAGGTAGAGCTGCAAAGGTGGCGATGCAAATGGCTGTCGATGACGTCAATGCAGACCCCGTAGTTCTTAATGGGACGAAACTGAACTTGCTAATGGAGGATGCCAGTTGCAACGTCTTCTTGGGATCGATTGGAGTGTTGCAAGATAAACTGGGGAAAAGCTGTGGTTTACACTTTTCTGAACTGAGCCTTTTTCTATACGCAGCGTTTCGGGCACTTGAGCAAGGGGTTGCGGCCATAATTGGTCCACAATCATCTTCCATCTCTCATGTGATTGCTCAAATTGCTACTGGTCTTCAAGTGCCTCAAGTTTCCTATGCTGCCACTGATCCAACCTTGTCGGCGCTCCAATTTCCTTTCTTTTTTCGTTCTATACCAAGTGACTCTGTGCAAATGACTGCAGTGGCTGATTTAATTGACTTCTATGTATGGAAAGAGGTCATTGCACTCTTCTTGGATGATGATTATGGGAGAAATGGAATATCTGCTCTGGGTGATGAACTTGAAAAACGTAGGATAAGGATTTCTCAAAAGTTGCCTATTAGCATTAATTTTGATCCGAATGAAATCACTAACTTGCTCAATCATTCCAAAGTGTTTGGTCCTCGTGTGTATGTTGTTCATGTCAACCCAGATCCTAGACTAAGAATTTTTAACATAGCCTACAAACTGAAAATGATGTCTAGTGACTTTGTCTGGCTTGTCACTGATTGGCTCTCTGCTACTCTAGATTCATTCTCCCCACAGAATCAGACCTCTCTCAGTGTTGTGCAAGGGGTGGTTGGATTTCGTCCATACATTCCAGACTCTTCCCAGAAAAGATCTTTCATTTCTCGGTGGATAAAAATGCAGAAAGAAAGCGCAGCAAGCATCGGGTTAAACCATTATGGATTTTATGCATATGATTCAATTTGGGCTGTTGCGCATGCAATCGACAAGTTTATTGAAATACACGGGAATTTTACATTCTTGGTCAATAATAACTCGAGGCTATTGAATAAAGAAGCAGCTGATATACGGCTTGACAAGCTCAAAGTCTTCACAGGTGGATCTGATCTGATCAATATATTATTGCAATCAAATTATACTGGTGTGAGTGGTCACCTTCAATTTAGTCCAGACAGGAATATTGTTAGTAGCAGCTATGAAGTTATCAATATCAATCCAATGGAAGAAATGACCAGGGTTGGATATTGGTCTAATGATTTTGGATTTTCAGTGGCACCACCTGAAACTCGTAAGAAGAGGGGACATGGTAGCGTTCCCCAAGATCAGAAGCTTAATATGATCACTTGGCCAGGTGGAATGACAGGAAGACCGCGTGGCTGGGTGATTGCTGATAATGCAAGACCACTAAGAATTGGAGTTCCCAAGAGAGCAAGTTTTGTTGAGTTTGTCACTGAGCTTCCTGGTAGTCATCAAATTCAAGGGTACTGCATTGATATTTTCAAGAAAGCACTGGAGTTTGTACCATATGATGTTCCTTATGTATTTAAGCCTTTTGGGAATGGTCAATCGAATCCCAATTATGACGCTCTTGTGAAGATGGTTGCTGACAAAGAATTCGATGCGGTAGTTGGAGACGTAGCGATTGTGACAAACCGTTCGAGGATTGTGGATTTTTCTCAGCCTTTCGCATCAACTGGTCTTGTTATAGTGGCTCCAATCAAGAATTCGAAATTAAGTGCTTGGGTATTTCTCAAACCATTTACGGCAGATATGTGGTGTGTCACTGCAGCTTCATTTATAATGATTGGAGTAGTTATATGGATTCTTGAGCACCGAATCAATGATGATTTCCGTGGTCCTCCTAAGAGGCAAATTGTGACGATGTGTTTCTATACAGCAAGCTTGGCTTCCATTCTTACAGTGGAGCAGCTTTCATCGCCCATCACCGGCATCGATAGCTTGATTGCAAGTAACTGGCCTATAGGGTACCCAGTAGGGTCATTTGCTTTCAATTATCTGACAGAGAGTCTTTATGTACAAAAATCAAGACTTGTCGCTCTAGGTAACCCCGAGGAATACGCAAGAGCTCTGCAGCTAGGTCCTTCTCGTGGAGGCGTGGGAGCTATAATTGATGAGCTTCCATACATAGAGTTATTTCTTTCAACACAAACTGATTTTGGTATTATTGGACTCCCATTTACCAAAAGCAGCTGGGGATTTGCATTTCAAAGAGAGTCTCCTCTGGCGCTTGATATGTCTACAGCAATTCTGAAACTCAATGAGAATGGAGAGCTTCAGAAGATACAAGAGCGATGGTTCTGTAAAATGGATTGTCCTGAAGAAAGAAGAAGCCACTCAGAACCTAATCAACTTCACTTGATCAGCTTCTGGGGTCTTTATCTCTCATGTGGTATCATCACACTCGCTTCTTTTCTCGTGTTTCTTCTGCGAACAATTCGCCAATACATGCGATACAAGCAAAAACAGAAAGATAATAATCCTTCTGGATCACGTGAAGCATCTGGTGGTAAATATTTCCACGTTATCTATAGCTTCTTTAATTTCATTGATGAGAAAGAAGAAGCCATCAAGAAAATGTTCACTCAGTGTGATGAGAATCCAGAAATCCAGCAGCCGACCTGA 2715 0.4188 MEHFMAVPRIIWIWIILCGSLACCQRPAFVNIGAVFTFDSVIGRAAKVAMQMAVDDVNADPVVLNGTKLNLLMEDASCNVFLGSIGVLQDKLGKSCGLHFSELSLFLYAAFRALEQGVAAIIGPQSSSISHVIAQIATGLQVPQVSYAATDPTLSALQFPFFFRSIPSDSVQMTAVADLIDFYVWKEVIALFLDDDYGRNGISALGDELEKRRIRISQKLPISINFDPNEITNLLNHSKVFGPRVYVVHVNPDPRLRIFNIAYKLKMMSSDFVWLVTDWLSATLDSFSPQNQTSLSVVQGVVGFRPYIPDSSQKRSFISRWIKMQKESAASIGLNHYGFYAYDSIWAVAHAIDKFIEIHGNFTFLVNNNSRLLNKEAADIRLDKLKVFTGGSDLINILLQSNYTGVSGHLQFSPDRNIVSSSYEVININPMEEMTRVGYWSNDFGFSVAPPETRKKRGHGSVPQDQKLNMITWPGGMTGRPRGWVIADNARPLRIGVPKRASFVEFVTELPGSHQIQGYCIDIFKKALEFVPYDVPYVFKPFGNGQSNPNYDALVKMVADKEFDAVVGDVAIVTNRSRIVDFSQPFASTGLVIVAPIKNSKLSAWVFLKPFTADMWCVTAASFIMIGVVIWILEHRINDDFRGPPKRQIVTMCFYTASLASILTVEQLSSPITGIDSLIASNWPIGYPVGSFAFNYLTESLYVQKSRLVALGNPEEYARALQLGPSRGGVGAIIDELPYIELFLSTQTDFGIIGLPFTKSSWGFAFQRESPLALDMSTAILKLNENGELQKIQERWFCKMDCPEERRSHSEPNQLHLISFWGLYLSCGIITLASFLVFLLRTIRQYMRYKQKQKDNNPSGSREASGGKYFHVIYSFFNFIDEKEEAIKKMFTQCDENPEIQQPT 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1005 904 Gene3D - 48 420 - -
Lele09g1005 904 CDD GluR_Plant 491 797 - -
Lele09g1005 904 PRINTS Metabotropic glutamate GPCR signature 58 77 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele09g1005 904 PRINTS Metabotropic glutamate GPCR signature 43 58 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele09g1005 904 PRINTS Metabotropic glutamate GPCR signature 172 188 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele09g1005 904 PRINTS Metabotropic glutamate GPCR signature 188 205 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele09g1005 904 PRINTS Metabotropic glutamate GPCR signature 153 172 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele09g1005 904 PRINTS Metabotropic glutamate GPCR signature 121 147 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele09g1005 904 CDD PBP1_GABAb_receptor_plant 31 450 IPR044440 -
Lele09g1005 904 SUPERFAMILY Periplasmic binding protein-like I 23 485 IPR028082 -
Lele09g1005 904 Pfam Ligand-gated ion channel 798 828 IPR001320 GO:0015276|GO:0016020
Lele09g1005 904 Pfam Receptor family ligand binding region 47 430 IPR001828 -
Lele09g1005 904 Gene3D - 605 650 - -
Lele09g1005 904 SMART GluR_14 492 799 IPR001320 GO:0015276|GO:0016020
Lele09g1005 904 FunFam Glutamate receptor 168 334 - -
Lele09g1005 904 Gene3D - 661 766 - -
Lele09g1005 904 PIRSF IGluLR_plant 100 654 IPR017103 -
Lele09g1005 904 PIRSF IGluLR_plant 2 92 IPR017103 -
Lele09g1005 904 PIRSF IGluLR_plant 653 903 IPR017103 -
Lele09g1005 904 Pfam Bacterial extracellular solute-binding proteins, family 3 494 797 IPR001638 -
Lele09g1005 904 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 859 - -
Lele09g1005 904 SMART AABind_6 492 800 IPR001638 -
Lele09g1005 904 FunFam Glutamate receptor 488 604 - -
Lele09g1005 904 SUPERFAMILY Periplasmic binding protein-like II 470 797 - -
Lele09g1005 904 Gene3D - 488 604 - -
Lele09g1005 904 Gene3D - 767 797 - -
Lele09g1005 904 Gene3D - 168 445 - -
Lele09g1005 904 FunFam Glutamate receptor 694 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1005 Lele-ChrLele09 19070216 19074489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1005 24 904 Ion Channels AT2G32400 51.616 0.0 931