Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1004 ATGTATTCTACGATTGATTCCTGTAAACATGTGGTCATACCTCACCCAAACAAATATTCTTACATAGCCAAGCTCAAGTCACTTAAGATCCTTCTTTACCCCCTTTTTTGGGGCCAAATGGCTGTGGCTCCAACGTTATTCCTTCTGGTTTTCTGGTTATGGATTCCCACAGAGGCTGTGGGAAGAACAGGAAATAGTACCATGACAAATAATAGTACTGTCCCTTCAAGACCTAACGTCGTGAGAATTGGAGCCCTGTTTACGTTTGATTCTGTCATTGGAAGATCTGCTAAACCTGCAATTTTGGCTGCTGTTGATGATGTTAATTCTGATACAAGCATTCTCGGCGGGATAAAGCTTGAAGTTATTTTACATGATACCAACTGCAGTGGATTTTTTGGAACCGTAGAAGCTTTGCAGTTAATGGAGAATGATGTGGTTGCTGTTATTGGTCCACAATCTTCTGGGATAGCTCATGTGATCTCTCATGTTGTTAATGAACTTCATGTACCTCTTCTCTCATTCGGGGCGACCGATCCTACTCTTTCTTCTCTGCAGTACCATTATTTCATCCGAACTACGCAAAATGATCATTTCCAGATGTATGCAGTTGCAGACTTGGTAGAATATTACGGATGGAGAGAAGTAATCCCCATTTTTGTTGATGATGATAATGGAAGAAATGGAGTTTCTGTATTGGGCGATGCGCTGGCGCAGAAACGTGCCAGGATCTCATACAAGGCCGCTTTCCCTCCAGATGCTTCCAGAACTGCCATTAATGAGCTGTTAAATGAAGTGAATTTAATGGAATCACGGGTTTATGTTCTTCATGTGAATCCTGATTCAGGTTTGGCCATTTTTTCTCTTGCGAAAAAGCTTGGCATGATGACCAATGGCTATGTTTGGATTGCAACTGATTGGCTTCCTTCAGTTCTTGATTCACAATCCCCAGCAAGCCTTGAAACATTGAATCTGTTACAAGGTGTTGTCGCATTTCGTAATCACGCTCCTTATACCGATACGAAGAACAATCTTCTCTCTAAGTTGAAAAAACTGAACAACAGTAAGATTTCGGGCTTCAATTCTTATGCTTTGTATGCATATGATTCTGTCATGCTTGCTGCTCATGCTCTGCATGATTTTCTCAATCATGGTGGAACCATATCTTTCACCAATGACCCTAACTTGCATGACACTAATGGAAGTTTGTTGCATTTATCATCACTTAGAACTTTCAATGGTGGCCCCAAGTTTCTCCAAACAATCCTGAGAATGAATTTCACTGGCGTTAGTGGTCAAATTCAGTTTGATAAGGACAAGAACTTGATTCGACCGGCGTATGATATCGTAAACATCGGTGCATCGGGTCCTCGGATTATCGGTTATTGGTCTAATCACTCTGGTCTTACAGAGATAGCTCCTGAAAATTTATACTCAAAATCATCAAACAAGTCTTCTGGCAATAATAAACATTTGTACAATGTGATATGGCCAGGTTTGACATCAATTACACCAAGAGGATGGGTTTTCCCTAATAATGGAAAACCGCTGAGAATCGCAGTGCCGAATCGAGTCAGCTTCACCGAGTTTGTTGGCAAAGAAAAGGACCCTCCCGGCGTAAAAGGTTTTAGCATCGATGTCTTCGAAGCCGCGTTGGATTTATTGCCTTATCCTGTTCCTAAGCAATATATACTATTTGGACATGGTGATAGAAATCCTAATTATGATGATCTTGTGAATCAGGTTGCACAAAATAAATATGATGCTGCCGTTGGGGATGTTACTATTGTCACAAACAGAACAAGGATTGTGGATTTTACTCAACCTTACATGACTTCAGGGTTAGTTGTAGTTGTTCCTGTCAGAGAGGTAAAGTCAAGCCCATGGTCATTTCTTAAGCCATTTACTGCACAAATGTGGTTTGTCACCGGTGCCTTTTTCCTTTTCGTCGGAGCCGTCGTATGGATTCTCGAACACCGGCACAATCATGAGTTCCGAGGACGACCAAGCAAACAACTCATGACAATCTTCTGGTTTAGCTTCTCAACAATGTTTTTCTCACAGAAAGAGAACACTGTGAGTGCTATGGGGAGATCGGTGCTAATCATATGGCTTTTTGTGGTGCTCATTATCAATTCAAGCTACACAGCAAGCTTGACATCAATCCTCACAGTGCAGCAACTTTCATCACAAATTGAAGGCATTGACAGTTTGATCTCAAGCACTCAACCGATCGGAGTTCAAGACGGCTCATTCGCCCGGAAGTATCTCATAGATGAGCTCAACATAGCTGAAGCAAGAATCATTATATTGAAAAATCTGCAGGACTATGTTGATGCCCTTACTCGTGGACCAAGAAATGGAGGTGTGGTAGCCGTTGTTGATGAGCTTCCTTATATTGAGCTGCTCATGTCCAGCACCAATTGTCAGTTCAGAACCGTAGGCCAAGAATTCACAAAAAGTGGATGGGGATTTGCATTTCAGAGGGACTCACCACTTGCGGTGGACATGTCGACGACGATTCTGCAACTATCAGAGAACGGTGACTTGCAGAAGATTCACGACAAGTGGTTGTTAAAGAACGAATGTTCTGCAAAACAAAACGATGATGAAGATTCAAACCAACTATCACTGAGTAGCTTCTGGGGATTGTTCCTCATAAGTGGGGTTGCTTGTCTTCTTGCTTTAATTGCTTTCTTTATAAGAGTGTTTTGTCAGTTCACTAAATTCTCTCCAGCCATTGATGAGAAGGTCGACCATGAAATACAACCTCGTATGCCGAAGACTAAACGGCAATGTCGAACTCCAAGTTTCAAGGATTTGCTCGAATTTGCTGATACAAGAGAAGCTGAAATCAAAGAGCAAATCAGGAAAAAGAGTAATAAACGTGGACGCCCACGAAGCTTTGAGATCTAA 2916 0.418 MYSTIDSCKHVVIPHPNKYSYIAKLKSLKILLYPLFWGQMAVAPTLFLLVFWLWIPTEAVGRTGNSTMTNNSTVPSRPNVVRIGALFTFDSVIGRSAKPAILAAVDDVNSDTSILGGIKLEVILHDTNCSGFFGTVEALQLMENDVVAVIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSSLQYHYFIRTTQNDHFQMYAVADLVEYYGWREVIPIFVDDDNGRNGVSVLGDALAQKRARISYKAAFPPDASRTAINELLNEVNLMESRVYVLHVNPDSGLAIFSLAKKLGMMTNGYVWIATDWLPSVLDSQSPASLETLNLLQGVVAFRNHAPYTDTKNNLLSKLKKLNNSKISGFNSYALYAYDSVMLAAHALHDFLNHGGTISFTNDPNLHDTNGSLLHLSSLRTFNGGPKFLQTILRMNFTGVSGQIQFDKDKNLIRPAYDIVNIGASGPRIIGYWSNHSGLTEIAPENLYSKSSNKSSGNNKHLYNVIWPGLTSITPRGWVFPNNGKPLRIAVPNRVSFTEFVGKEKDPPGVKGFSIDVFEAALDLLPYPVPKQYILFGHGDRNPNYDDLVNQVAQNKYDAAVGDVTIVTNRTRIVDFTQPYMTSGLVVVVPVREVKSSPWSFLKPFTAQMWFVTGAFFLFVGAVVWILEHRHNHEFRGRPSKQLMTIFWFSFSTMFFSQKENTVSAMGRSVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGVQDGSFARKYLIDELNIAEARIIILKNLQDYVDALTRGPRNGGVVAVVDELPYIELLMSSTNCQFRTVGQEFTKSGWGFAFQRDSPLAVDMSTTILQLSENGDLQKIHDKWLLKNECSAKQNDDEDSNQLSLSSFWGLFLISGVACLLALIAFFIRVFCQFTKFSPAIDEKVDHEIQPRMPKTKRQCRTPSFKDLLEFADTREAEIKEQIRKKSNKRGRPRSFEI 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1004 971 CDD PBP1_GABAb_receptor_plant 82 471 IPR044440 -
Lele09g1004 971 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 94 110 - -
Lele09g1004 971 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 285 308 - -
Lele09g1004 971 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 154 182 - -
Lele09g1004 971 Gene3D - 100 444 - -
Lele09g1004 971 CDD GluR_Plant 515 858 - -
Lele09g1004 971 Pfam Receptor family ligand binding region 98 452 IPR001828 -
Lele09g1004 971 Gene3D - 628 749 - -
Lele09g1004 971 Pfam Bacterial extracellular solute-binding proteins, family 3 539 859 IPR001638 -
Lele09g1004 971 Gene3D - 752 862 - -
Lele09g1004 971 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 82 927 - -
Lele09g1004 971 PIRSF IGluLR_plant 40 970 IPR017103 -
Lele09g1004 971 Pfam Ligand-gated ion channel 860 892 IPR001320 GO:0015276|GO:0016020
Lele09g1004 971 FunFam Glutamate receptor 628 758 - -
Lele09g1004 971 FunFam Glutamate receptor 512 628 - -
Lele09g1004 971 Gene3D - 512 627 - -
Lele09g1004 971 FunFam Glutamate receptor 196 364 - -
Lele09g1004 971 SUPERFAMILY Periplasmic binding protein-like II 494 861 - -
Lele09g1004 971 SMART GluR_14 518 860 IPR001320 GO:0015276|GO:0016020
Lele09g1004 971 FunFam Glutamate receptor 754 862 - -
Lele09g1004 971 Gene3D - 196 469 - -
Lele09g1004 971 SUPERFAMILY Periplasmic binding protein-like I 76 508 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1004 Lele-ChrLele09 19062353 19068253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1004 77 825 Ion Channels AT1G05200 66.489 0.0 1066