Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0993 ATGGAGTCCATTTGCCCAATAGACTCGTTGTGTGCCAATGAAATTGCAGCACTTCTCAGTCCTCCGTCACCTCTTCAAGTTCAGGAATATTATCATAAGCTTTTATCTACAAGGAAGTGCAGTAGCATCATAGTCAAACAGGATGGAAATTATGGAAAGGGTGTGTATGCTGCTGTGGACTTCAATGAAGGGGAGCTTGTCCTGAAAGATCCAATGCTAGTTGGGGTTCAACACTCTTCCAACAAGATCGACTGTTTTGTCTGTAGCTCCTGCTTTTGTTTTATTGGTTCTATTGAACTTCAAATTGGAAGGAGGCTTTACTTGCAACAATTAGGGGCTTCTGAGAGTCATGATTGTGATGTGAGTAACTCTTCAAACATACCAAAACACAACAATAATGATACAGATTCATCTGATGGAGAAGACAATTCATATAAAAGAAAGAACGATGGTGCTGGGGAATGTAGTTTTGGCAGTTCTGAAGCTAAAGTTCATCTACCTGAAGGTTTTGTTCAATCATTAGTGAATGGCCATATGATGCTGCCTTACTCTAAGGAGTTCTCCTTGCCACCAGCTGTCCCATGCCCTGGTGGATGTGGAGAGTCATTCTACTGCAGCACATCATGTGCAGAGGCCGATTGGGAATCTTGTCATTCTTTGATTTGTACTGGTGAGAGGTCTGATACAGCACGTAGGGAGGCACTTCTAAAATTCATCAAACATGCTAATGAAACAAATGATATATTCCTCCTTGCTGCAAAGGCTATTTCTTCCACCATATTAAGGTACCACAAGTTAAAAGAAAGTTGTCTTTTAGAGAAATGTAAACATGATACATCACATCTTTCAAACCATTACGATCTCACTACTCTTTTGGACGCTTGGAGACCTATAGCAATGGGACACAAGAGAAGGTGGTGGGACTGCATTGCATTGCCAAATGATGTTAATTCTTCTGATGAAGTTTCATTCAGGATGCAAATAAGAGATTTGGCATTTGAGTCACTCCAACTTCTAAAGACAGCTATATTTGACAGAGAGTGTGAACCATGTATCCTTCCTAATGCTAAATTGATGATCTATTTGTTCATGCAAATACCGGTGCCATTATGTTTTATGTATCAGAAAAATAAAATCTTCTTGTTGATCTTTGATCTAAGTCCTTCACTACACTCAGTATTCTCCCTAGAAATTTATGGGCACATCATTGGCATGTTTGAGCAAAATAATCTTGATTTGGTGGTAGCCTCTCCTGTGGAGGATTACTTTTTATACATCGACGATCTAAAATATCCTGAAAAGGAAAAAGCTCAGGAAATTACACAACCAATTCTAGATGCTCTTGGCGAAGACTATTCCATTTGTTGCCAGGGAACTGCATTTTTTCCGTTGCAAAGCTGCATGAACCATTCCTGCTGTCCTAATGCAAAGGCGTTCAAAAGAGAGGAGGATAGAGATGGTCAAGCAACAATAATTGCACTGAGGTCCATTCGTAAAGGAGAAGAGATAACTATCTCATATGTGGATGAGGATCTTCCATTTGAAGAGAGACAGGCATCTCTTGCAGATTATGGTTTCAGATGTGGGTGCCCAAAGTGCGTTGAAGAACAACCATAGATTTCCATCCTTCGGTCTTCAGTTGGGTTTCTCAAGGGAGCTATTCAATTTGGAGCCGCATACTCGACTCTTCGAGTTCTAAGGAATCTTGCTATTAACTTTTATCACGAGCCTGATAGTCTAATTTCACGAGCTATATTCTTTCTTGGAGCATTGTTCAAAGAATATTTTGATGTAGAGCGTGTTTGCAATCTTGAAGATCTGACTGTAGGCAAGACTATTCAGCTTATACATGGTGTCACTTGTTACTGCTGGAGTGCTGGCGTGAATTGCTCATACAAAGTTCCGTCCTCACTTCTCAGATGCATGATGACTGAGATTGATAGGAAACGCAAGAGAGATAAGGGCATTGCAGGCCAAAGTGATGTTTCTGGAAGCTTGAGATTGTCTGATAGAATCCAAGATAAAGAAGGAAAACTGCATTCCTCTGGTTCAAAAAATAGTCTTGAGGAGAAGCTGAAGAAAGTACAGTCAGAAATCAACATGCTTGATCAGCAAAAGTTTCAACTTGGGTTGAAGGAAAGTAGGATTGGTGTGCCATTAACCAGCATGGCAGCTCATGTGGTTGATGAGGAAGTTGAGATTGAGCTTGATGATAACATTGAGAACACTGAAACTGCACCGGCAGAAAATGAGAATGAAAAGGTGAGGAGTTTACCAATGCTTCCCCCAACTCTGACTTCTTCCGGGACGAATCATTCACAGTATGAGGGTGATGATGACAATGTGGCTGTGGATGGGCTTGATGAAGAAGCAGAAATTGCACACATGGATATGGTCTGA 2400 0.4079 MESICPIDSLCANEIAALLSPPSPLQVQEYYHKLLSTRKCSSIIVKQDGNYGKGVYAAVDFNEGELVLKDPMLVGVQHSSNKIDCFVCSSCFCFIGSIELQIGRRLYLQQLGASESHDCDVSNSSNIPKHNNNDTDSSDGEDNSYKRKNDGAGECSFGSSEAKVHLPEGFVQSLVNGHMMLPYSKEFSLPPAVPCPGGCGESFYCSTSCAEADWESCHSLICTGERSDTARREALLKFIKHANETNDIFLLAAKAISSTILRYHKLKESCLLEKCKHDTSHLSNHYDLTTLLDAWRPIAMGHKRRWWDCIALPNDVNSSDEVSFRMQIRDLAFESLQLLKTAIFDRECEPCILPNAKLMIYLFMQIPVPLCFMYQKNKIFLLIFDLSPSLHSVFSLEIYGHIIGMFEQNNLDLVVASPVEDYFLYIDDLKYPEKEKAQEITQPILDALGEDYSICCQGTAFFPLQSCMNHSCCPNAKAFKREEDRDGQATIIALRSIRKGEEITISYVDEDLPFEERQASLADYGFRCGCPKCVEEQPXISILRSSVGFLKGAIQFGAAYSTLRVLRNLAINFYHEPDSLISRAIFFLGALFKEYFDVERVCNLEDLTVGKTIQLIHGVTCYCWSAGVNCSYKVPSSLLRCMMTEIDRKRKRDKGIAGQSDVSGSLRLSDRIQDKEGKLHSSGSKNSLEEKLKKVQSEINMLDQQKFQLGLKESRIGVPLTSMAAHVVDEEVEIELDDNIENTETAPAENENEKVRSLPMLPPTLTSSGTNHSQYEGDDDNVAVDGLDEEAEIAHMDMV 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0993 799 MobiDBLite consensus disorder prediction 742 781 - -
Lele09g0993 799 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 13 537 IPR044237 GO:0008168
Lele09g0993 799 MobiDBLite consensus disorder prediction 119 152 - -
Lele09g0993 799 MobiDBLite consensus disorder prediction 134 149 - -
Lele09g0993 799 Pfam SET domain 444 507 IPR001214 GO:0005515
Lele09g0993 799 MobiDBLite consensus disorder prediction 119 133 - -
Lele09g0993 799 MobiDBLite consensus disorder prediction 761 777 - -
Lele09g0993 799 Coils Coil 685 705 - -
Lele09g0993 799 Gene3D SET domain 430 538 IPR046341 -
Lele09g0993 799 SUPERFAMILY SET domain 38 533 IPR046341 -
Lele09g0993 799 CDD SET_SMYD 447 533 - -
Lele09g0993 799 ProSiteProfiles SET domain profile. 41 508 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0993 Lele-ChrLele09 18920129 18934256 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele09g0993 SET 5.2e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0993 09 18920129 18934256 Lele30g0944 30 13093153 13093710 CCT
Lele09g0993 09 18920129 18934256 Lele32g0440 32 2785777 2786334 CCT
Lele09g0993 09 18920129 18934256 Lele09g0993 09 18920129 18934256 ECH