Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0985 ATGAATCCGAAAGGAGTAGTAAGCAGTTATGTTTGCCTTTCCAACATATATGCTGCTGAGAGACGATGGAATGATGTTGAAAAAGTGAGGGCACTGGTGAGAAGAAAGAGATTAAGGAAACCACCTGGTTACAGTTTTGTGGAGCTAAATGAGATGGTTCATCAAATTTTTGTTGGAGATACATCGCACCAACAGTCAGAAGATATTTGTGCCAAATTAAAGCACTTGAATGAGCAACTTAAGAATGCTGGTTACAAGCCTGACACTTATTCAGTTCTCTATGATGTTGAGGAAGACGTAAAGGAGAAGATGCTCTGGGTTCAGAGAGGAGGAAAATTTGAGTCATGTGTTCTTTCAATGCCCATGGTCAAGAGCAGTCTGTGCGCTTTAATCCTCTCTCTCTCACACACTGTTTCTTCTGCTTTCACTCTCAAGATGGACATCGACTCCTCACACACCTCCAATTGGCTCTGTGATTATGGCTTTGATGTTTCTGTTGCCGGAGCTGAATTCCCCGTCGTCCCTTCCGGCGGTTTCAGCTGGGTGTCTCCTACTTTCACCGATTCTTCTGATACGAGTTTGGACCTGGAATACTCACTGGACAATTCAACTTTCCTGGAAAATGGCCCTTCAAAGCGGTTGAGGACTGAATCATGTGCATCTGGCTCCAAGGCATGCCGTGAAAAACAACGGAGGGATAGACTGAACGAGAGGTTCCTGGAATTGAGTTCTATCTTGGAGCCTGGTAAGCTTCCCAAGGTGGATAAGACTGCTATATTAAGTGATGCAGTTCGAACTTTAACAGAACTACGAAGCGAAGCCCAGAAGCTGAAGGACACAAATGATGAATTGCTTGAAAAGATCAAGGAACTGAAGGCAGAGAAGAATGAGCTTCGTGATGAGAAGAATAGGCTGAAGATGGATAAAGAAAAGCTGGAGCAACAGGTCAAAGGGATGAATGCACAGCCGACCTTTCTTTCTCATCCTTCTGCTGCTGCATTTACTGCTCAAGGCCAAACTGCAAGCCACAAGTTGATACCTTTTGTTGGCTATCCTGGAATCGGCATGTGGCAATTTTTGCCACCTGCTGCTGTTGATACATCTCAGGATCATCTTCTTCGCCCTCCCGTTGCTTAA 1137 0.4477 MNPKGVVSSYVCLSNIYAAERRWNDVEKVRALVRRKRLRKPPGYSFVELNEMVHQIFVGDTSHQQSEDICAKLKHLNEQLKNAGYKPDTYSVLYDVEEDVKEKMLWVQRGGKFESCVLSMPMVKSSLCALILSLSHTVSSAFTLKMDIDSSHTSNWLCDYGFDVSVAGAEFPVVPSGGFSWVSPTFTDSSDTSLDLEYSLDNSTFLENGPSKRLRTESCASGSKACREKQRRDRLNERFLELSSILEPGKLPKVDKTAILSDAVRTLTELRSEAQKLKDTNDELLEKIKELKAEKNELRDEKNRLKMDKEKLEQQVKGMNAQPTFLSHPSAAAFTAQGQTASHKLIPFVGYPGIGMWQFLPPAAVDTSQDHLLRPPVA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0985 378 Gene3D arf6 gtpase in complex with a specific effector, jip4 269 323 - -
Lele09g0985 378 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 219 270 IPR011598 GO:0046983
Lele09g0985 378 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 225 294 IPR036638 GO:0046983
Lele09g0985 378 Pfam E motif 8 48 IPR046848 -
Lele09g0985 378 PANTHER BHLH TRANSCRIPTION FACTOR 150 378 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Lele09g0985 378 Pfam Helix-loop-helix DNA-binding domain 223 270 IPR011598 GO:0046983
Lele09g0985 378 SMART finulus 225 276 IPR011598 GO:0046983
Lele09g0985 378 Gene3D - 212 268 IPR036638 GO:0046983
Lele09g0985 378 CDD bHLH_AtILR3_like 224 299 - -
Lele09g0985 378 Coils Coil 63 83 - -
Lele09g0985 378 Coils Coil 260 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0985 Lele-ChrLele09 18789151 18796486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0985 150 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 56.356 1.66e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele09g0985 DYW_deaminase 1.3e-09 CL0109