Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0980 ATGCAAGAGCGTTGCATGTACATGTGTCATGATATGTACTTAATGCTAACAGGGCATGCAGAAAGTAGTATGCGAGCTCCTAATGAGTTGGCTTCTGTGACTTGGACAGCCGTCGATGATTCATCCTCCTCCTCCCTCGACCCATTGTTTTCTGGCGTCAGCCTTCAGTCCATTCTCAGCCTCCACCATCCCTCCGTCTTCTCTGACTACGCCGCCGGCAATGGTCTCCCCAGTCTGAACTTCTTATCCGATGATTCCCTGTCTCTGAGTCTACAGGGAGAAGCTACCCAGGGCTTCAACACTTATGAGGACCACATTGTAGAGCCACCAGAGAAGAAGCCGACTATCTTCCCCAAATCTGACTCAGGTCTCTTCGAATACATTCCGACCTCTGGTACCACTTCTTACCCCTTCGACTTCTTCTCCGGCCATGGCACTCCCAGCTTCTACGATTCGTCAACCTTCAACCTTCTCCCTCAACTCCATTCCGTCGAGTCCTTTTCTCATAAGCGTCCTCTTTTCGACTCCCTCATTTCCACTCCCAACACCGTGCCGCCACACATTCCTGACCCTGCCACCGTCGTCGGCAGCAACCTCTTGGCCAACACCAAACCGGCCTCTTCTTCGCAGGGTGTTCCTCCCGTGGGTGAAAAATCCTCTCCGGTGATCCCACAAAGCAACCTGGCACGTAAGCGGCGGCAGAAGCTGAGCGACAAGACTCGGTGCTTGCAGAAATTGATGCCGTGGGACAAGAACATGGACCAAGCGACGCTGCTGGAGGAGGCGCACAAGTACGTGAAATTTCTGCAGGCTCAGTTCAATGTTCTCCAATCCATGCCCTCCTATTCGCCTTTCCTGTCCCACTCCGGTGCTTCGCATTCCCATTCCTCCATTCAACACGGCGACGTGTTTGGGGATTTGGAGAGGCTGAATCGCAACCAGTTATATAGCTTTGAAGAGGATAATATAGAACATGATGTGTTAGTGCTTTTTGCGGTTACGAATCCAAAATCTTTATAGCGCACTGGCTCAGATGCAGCGACTGAGCTTTTAGGGTTAGGGGTTTTGATCTGCCGCGGCACTATGGGGTTATCACTAAATGCTACAAGATCCTAG 1116 0.5152 MQERCMYMCHDMYLMLTGHAESSMRAPNELASVTWTAVDDSSSSSLDPLFSGVSLQSILSLHHPSVFSDYAAGNGLPSLNFLSDDSLSLSLQGEATQGFNTYEDHIVEPPEKKPTIFPKSDSGLFEYIPTSGTTSYPFDFFSGHGTPSFYDSSTFNLLPQLHSVESFSHKRPLFDSLISTPNTVPPHIPDPATVVGSNLLANTKPASSSQGVPPVGEKSSPVIPQSNLARKRRQKLSDKTRCLQKLMPWDKNMDQATLLEEAHKYVKFLQAQFNVLQSMPSYSPFLSHSGASHSHSSIQHGDVFGDLERLNRNQLYSFEEDNIEHDVLVLFAVTNPKSLXRTGSDAATELLGLGVLICRGTMGLSLNATRS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0980 371 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 223 315 IPR045843 GO:0003700|GO:0006355
Lele09g0980 371 SMART finulus 226 275 IPR011598 GO:0046983
Lele09g0980 371 Gene3D - 224 281 IPR036638 GO:0046983
Lele09g0980 371 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 220 269 IPR011598 GO:0046983
Lele09g0980 371 MobiDBLite consensus disorder prediction 199 227 - -
Lele09g0980 371 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 222 281 IPR036638 GO:0046983
Lele09g0980 371 MobiDBLite consensus disorder prediction 199 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0980 Lele-ChrLele09 18750439 18754495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0980 232 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 57.143 1.43e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele09g0980 None None None