Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0959 ATGGTGAGAACACTTTCGTACGACAAGAGTGGAATTAAAAAAGGGACCTGGACACCCGAGGAAGACAGGAAGCTAATTGCCTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTCCCCAGGTTTGCAGGACTGGCGAGGTGTGGAAAGAGTTGTAGACTGAGGTGGATGAATTATCTGAGACCCAATATCAAAAGAGGCAATTACACTCCTGAAGAAGAGGAACTTATCATTAAACTTCACAAAGAACTGGGCAATAGATGGTCGCCGATTGCAGCTCATTTGCCCGGAAGAACTGATAACGAAATAAAGAACCACTGGCACACCACCCTCAAGAAGCGATCTCAACACAACTCGAGCGAACGCCATAAATCTAATAAAAAGTCAAAAGATGATCATACTTCTTTCACTTGTAAACCACACAATGGTTCTTCTTCTTCTTCTCAGACATCTGATTCTTCTTCTTCCCAGATCGAAATCCTGGATTCTACCCCATTGTCTCCACAGTCATATTCCTCCATCAGCTGCATATCCTCTTCTGTAAATTCAAGTCTTCAAGATGATGATGACTTATCTTTTCTCAATGCTTTCACTGATCCTGCAGAGACGACCCAGAATTTCTGGAGCCACTTGAATTTTGATGACATATTTTGCAATGATTCAACAGAAACAATACTGCCAGTGCAAAATCCTCCTCATCAAACTCCATCTGTTATTCCTCATTCTTCCACGTTCGTCGAGGATGATTTTGCTTTCCTAGATTCACTTTCCCAGGAACCATTTGAGAGTTTTCTGATGATGGCGACACAAATGGCTGACGTGTCGTCTTACCCTCAAACACAGTCACAAGCACCATTGGGAGCTGAATTAGAATATCTTTATCCACTTTGTGATCTGGATCTCTGGAGTCAAAGTAGTAGTAATTTGTATGTATGA 939 0.4228 MVRTLSYDKSGIKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYLRPNIKRGNYTPEEEELIIKLHKELGNRWSPIAAHLPGRTDNEIKNHWHTTLKKRSQHNSSERHKSNKKSKDDHTSFTCKPHNGSSSSSQTSDSSSSQIEILDSTPLSPQSYSSISCISSSVNSSLQDDDDLSFLNAFTDPAETTQNFWSHLNFDDIFCNDSTETILPVQNPPHQTPSVIPHSSTFVEDDFAFLDSLSQEPFESFLMMATQMADVSSYPQTQSQAPLGAELEYLYPLCDLDLWSQSSSNLYV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0959 312 Gene3D - 6 66 - -
Lele09g0959 312 MobiDBLite consensus disorder prediction 123 138 - -
Lele09g0959 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele09g0959 312 SMART sant 66 114 IPR001005 -
Lele09g0959 312 SMART sant 13 63 IPR001005 -
Lele09g0959 312 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele09g0959 312 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele09g0959 312 Gene3D - 69 140 - -
Lele09g0959 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 206 - -
Lele09g0959 312 MobiDBLite consensus disorder prediction 112 170 - -
Lele09g0959 312 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele09g0959 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele09g0959 312 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele09g0959 312 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele09g0959 312 MobiDBLite consensus disorder prediction 139 170 - -
Lele09g0959 312 CDD SANT 16 61 IPR001005 -
Lele09g0959 312 CDD SANT 69 112 IPR001005 -
Lele09g0959 312 FunFam MYB-related transcription factor 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0959 Lele-ChrLele09 18204287 18205497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0959 1 119 MYB Transcription Factor Family AT2G31180 68.067 6.54e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele09g0959 Myb_DNA-binding 2e-12 CL0123