Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0940 ATGCGTTCTCCCTCTTCTTCTTCTTCTTCTTCTTCTTCTGTCATTTTTTGTTGGAGATTCTCTACCAATTCGACAAATGTTACCCCTAAGCGCATATACCGTGGGCCTATGATTCAAAATCTGGAAGCAGGAAACTCCCAAATTTGTGGCCTTTCAAGCCCCAACAATGGCCTTAACTGCTGCCAATGGCCTGGGTTCAACACCAATATTGCCAAAAGCTTCTCAAGCATATCTTTGGGAGAGAATTTCTTGTGTGGGTTATTGGAAAAATCTGGGAATATTAATTGCCTAGGAAATAATAGCATAGTTGGAGATGAACCGACGGGGAATTACTCTGTGATTGCTGCAGGGACGAGACATGCTTGTGCTATCTCTTCCATTAATGGAAGCTTGCATTGTTGGAGTGACGTACCAGGAGCAGCCACAATGACGCCTCAAGGAAGATTCATCTCTTTGGCTTTGGGAGATAATCGAAGTTGTGCTTTGAGGGCTGTGAACCGAACAGTTGATTGTTGGGGAACAGACAATTTCAGCATACCAGAGAGCATGAGAAACGCATCTTTTCAAGCAATTACAGCTAAAGGAAGTGTTTTCTGTGGTGTTATGTCTGATGATTGTTCTTTGCATTGTTGGAGAAATGATAAGTTGGTGATGAGCGGGACAGCTCTTAAGGTGTTTGATAAGGTGCTACCTGGTCCTTGTAGAACTGAATGTCCATGTGGACCATTGCCAGGTTCTGCACAGTTTTGTGATCTGGGTCAATCTATTTGCAGTTCTTGTGTTGAGAGACAACTATCTGAATTCCAACCATCACCCTCGCTGCCACCGCCACCGCCACCGCCACTGATGAGTGCTGCTTCACAATCCAGACAAAGTGATTGGAGCAGCAAAATGGTGGCATTTCTAGTGGTTGGTTGCGTTGGTTCAGTTTCTTTGATACTAGTCTTGGCATTATTTCTCTACAGGTACTGCAAAGGCCGAGGATGCCGGCGTGTCCACGACTCTGGCCCGTTGGATGAGCCAGTAGCTCAAACGGCAATCCAATCAACTCTAGAGAAAAGATTGAGCCATATGATTAGCATGGGAAATGGAGGCCACTTGGAGGAATTTTCTTTGCAAATACTATTGGAAGTAACCAACAATTTCTCAGAAGATAAAAGAATAGGAACAGGCAGTTTTGGTTCAGTCTATCATGCCACACTGAAAGATGATAGAGAAGTCGCCATTAAAAGAGCCGAGATCTCACCCACCTCCCCATCATACAAAATCCTCGGAGGCTCCAAGCGTCAAGAAGATAAAGACAATGCGTTTGTGAATGAACTCGAATCTTTATCAAGACTCAACCATAAGAATCTGGTAAGATTACTTGGTTTCTTTGAGGACAAGAATGAGAGAATTCTAGTCTATGAGTTTATGAACAATGGTAGCCTAACCGACCACCTTCACAAGTTCCATAGTTCCACTTCAAATTCTCCTCTCATGTCATGGTTAGGACGCATCCAAGTAGCTCTAGATGCAGCCAGGGGCATAGAGTACCTGCACGAGTATGCAATTCCACCGATCATTCATCGTGATATCAAATCAGCAAACATACTATTAAACGCAAAATGGATCGCCAAAGTATCAGATTTTGGACTCTCCCTAATGGGTCCTGAAGATGAGGAGTCTCATCTTTCTCTTCTTGCTGCAGGCACCGTAGGGTACATGGATCCAGAGTACTACCGGCTGCAACACCTGACCACAAAGAGCGATGTGTACAGTTTTGGTGTTGTTTTGCTTGAACTTCTTTGTGGGTATAAAGCGATACACCGGAATGAGAATGGGTCGCACAGAAATGTGGTGGATTTTGTGGTGCCATACATTGTGCAGGATGAGATTCATAGGGTTTTGGATCGGAGATTGCCACCACCAACACCGTATGAGATAGAGGCAGTGGCATTTGTGGGATATTTGGCGGCAGATTGTGTGAGTTTAGAAGGACGTTATAGGCCTACTATGACAAATGTTGTAAATGGGTTGGAAACAGCAGCGGATGCTTGTTTAGCCCAACCAAAACCAGCACTCTCGCTGTAA 2073 0.4443 MRSPSSSSSSSSSVIFCWRFSTNSTNVTPKRIYRGPMIQNLEAGNSQICGLSSPNNGLNCCQWPGFNTNIAKSFSSISLGENFLCGLLEKSGNINCLGNNSIVGDEPTGNYSVIAAGTRHACAISSINGSLHCWSDVPGAATMTPQGRFISLALGDNRSCALRAVNRTVDCWGTDNFSIPESMRNASFQAITAKGSVFCGVMSDDCSLHCWRNDKLVMSGTALKVFDKVLPGPCRTECPCGPLPGSAQFCDLGQSICSSCVERQLSEFQPSPSLPPPPPPPLMSAASQSRQSDWSSKMVAFLVVGCVGSVSLILVLALFLYRYCKGRGCRRVHDSGPLDEPVAQTAIQSTLEKRLSHMISMGNGGHLEEFSLQILLEVTNNFSEDKRIGTGSFGSVYHATLKDDREVAIKRAEISPTSPSYKILGGSKRQEDKDNAFVNELESLSRLNHKNLVRLLGFFEDKNERILVYEFMNNGSLTDHLHKFHSSTSNSPLMSWLGRIQVALDAARGIEYLHEYAIPPIIHRDIKSANILLNAKWIAKVSDFGLSLMGPEDEESHLSLLAAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLELLCGYKAIHRNENGSHRNVVDFVVPYIVQDEIHRVLDRRLPPPTPYEIEAVAFVGYLAADCVSLEGRYRPTMTNVVNGLETAADACLAQPKPALSL 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0940 690 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 472 683 - -
Lele09g0940 690 ProSiteProfiles Protein kinase domain profile. 382 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0940 690 SUPERFAMILY Protein kinase-like (PK-like) 359 673 IPR011009 -
Lele09g0940 690 SUPERFAMILY RCC1/BLIP-II 15 216 IPR009091 -
Lele09g0940 690 MobiDBLite consensus disorder prediction 270 284 - -
Lele09g0940 690 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Lele09g0940 690 Gene3D - 9 229 IPR009091 -
Lele09g0940 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Lele09g0940 690 CDD STKc_IRAK 388 674 - -
Lele09g0940 690 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 108 682 IPR044815 GO:0004674
Lele09g0940 690 Pfam Protein kinase domain 383 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0940 690 Gene3D Phosphorylase Kinase; domain 1 354 471 - -
Lele09g0940 690 Gene3D Transferase(Phosphotransferase) domain 1 472 683 - -
Lele09g0940 690 MobiDBLite consensus disorder prediction 268 288 - -
Lele09g0940 690 SMART serkin_6 382 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0940 Lele-ChrLele09 11357743 11359815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0940 10 685 Receptor kinase-like Gene Family AT5G47850 51.170 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele09g0940 Pkinase 2.7e-43 CL0016