Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0939 ATGGCCAATTCCATCTCCTTATTTGTCGCATATTTGCGACTGGATAGATCTGTTGAGCTGGAGAAGCGTTTTGAAATTGTCAAAACATTCAATTCAGACCCTACCATTGATGTATTGTTGCTTACAACGCATGTGGGTGGGCTTGGTTTGAACCTGACATCCGCAGATACCCTTGTTTTTGTGGAGCATGATTGGAATCCAATGCGAGATCATCAGGCTATGGACAGAGCACACCGTTTGGGTCAGAAAAAAGTTGTCAATGTCCACCGTCTAATAATGCGTGGTACTTTGGAAGAAAAGGTCATGAGTCTACAAAGATTCAAGGTTTCAGTGGCTAATGCTGTCATTAATGCTGAAAATGCCAGCATGAAAACAATGAATACAGATCAGTTGCTTGATTTGTTCACACCGGCAGAAACCTTGAAGAAGGGAGCTTCTGCTGCGAACCGATCAAATGACACAGATGGAGATACTAAATCGGTGCGCAGGGGGAAGGGGTTGAAAGCAGTACTCGGAGGTTTGGAAGAGCTTTGGGACCATTCACAATATACAGAAGAGTACGATCTGACTCAATTTTTGTCAAAGCTTAATGGCTGA 597 0.4338 MANSISLFVAYLRLDRSVELEKRFEIVKTFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASMKTMNTDQLLDLFTPAETLKKGASAANRSNDTDGDTKSVRRGKGLKAVLGGLEELWDHSQYTEEYDLTQFLSKLNG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0939 198 CDD SF2_C_SNF 8 92 - -
Lele09g0939 198 PANTHER TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 9 197 IPR044972 GO:0003677|GO:0016887|GO:0017025
Lele09g0939 198 SMART helicmild6 3 81 IPR001650 -
Lele09g0939 198 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 127 IPR001650 -
Lele09g0939 198 Pfam Helicase conserved C-terminal domain 10 81 IPR001650 -
Lele09g0939 198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 136 IPR027417 -
Lele09g0939 198 Gene3D - 6 166 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0939 Lele-ChrLele09 11324381 11327872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0939 10 136 RAD5 or RAD16-like Gene Family AT5G22750 34.375 1.58e-20 87.0