Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0938 ATGCCACATGGAAAACCACTCCTAGCTGCAAGAGATCCCAAGTGCTCTTCTAGGGATGCTGAAGCTGGAGTTCTTGCTATGGAGGCATTGCATAAGCAGGTCATGCCTTTCCTTCTCCGTAGAACAAAGGAAGAAGTCTTGTCTGATCTGCCAGAAAAAATAATTCAAGACAGATACTGTGATTTAAGTCCTGTACAGCTTAAACTCTATGAACAGTTTTCTGGTTCTCATGCCAAACAAGAAATCTCATCTATGGTAGCAGTGAATGAATCAGCTGCGACAGAAGGAAGCAGCAGATCACCCAAAACATCTTCACATGCACTTCAATACTTGCTAAAGTTGTGCAGTCATCCTTTACTTGTCGTTGGTGAGAAGATTCCTGATCAACTCTCTACCATTCTCTCAGAATTGTTGCCTGCTGGCTCTGAAATCATTTCAGAACTTCATAAACTACATCACTCCCCAAAATTGGTGGCTCTCCAGGAGATATTGGAAGAATGTGGAATAGGAGTTGATTCTTCAGGTTCTGAGAGTGGTGTTAGCATTGGGCAGCACAGGGTCTTGATATTTGCTCAACATAAGGTGATTCTTACCCTTGAGGACTGA 606 0.429 MPHGKPLLAARDPKCSSRDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSHAKQEISSMVAVNESAATEGSSRSPKTSSHALQYLLKLCSHPLLVVGEKIPDQLSTILSELLPAGSEIISELHKLHHSPKLVALQEILEECGIGVDSSGSESGVSIGQHRVLIFAQHKVILTLED 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0938 201 Pfam SNF2-related domain 27 118 IPR000330 GO:0005524|GO:0140658
Lele09g0938 201 Gene3D - 51 198 IPR027417 -
Lele09g0938 201 Gene3D - 25 50 IPR038718 -
Lele09g0938 201 PANTHER TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 3 198 IPR044972 GO:0003677|GO:0016887|GO:0017025
Lele09g0938 201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 194 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0938 Lele-ChrLele09 11318917 11319705 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lele09g0938 SNF2_N 2.5e-09 CL0023