Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0937 ATGCTTCCAGAATTGCTTGGACGTGTTCTTCCTGCATGCAAATTAGGGTTGGATGACCCAGATGATGATGTCCGAGCAGTTGCTGCTGATGCTTTAATACCAGCTGCAGCTGCAATTGTTGCTTTACAGTGTCAAACTTTGCAGTCCATTGTGATGCTATTGTGGGACATTTTGCTTGATTTGGATGACTTAAGTCCATCCACTAGCAGGGACAGGAAGGCAATGCAGGACAATAATGTGGATTTCAAACTCAATGTTGTTGGGCTAGTGGTGGGTGACTATGTAATGAATCTTCTGGCAGAATTTTATTCTCAGGATGTGATGGTTCCAAAGATGAACCAAGCATTTGGATTGGGAGATACAGAAATGGGTAATCTAATTGGAGTTGGTGACAGCGGCAGTAGTGATCATGACAAAAGTCCTTATATGCTATCAATGCTAGCACCACGCTTGTGGCCTTTTATGAGGCATAGCATCACCTCTGTTCGGTTTTCAGCTATTCGCACTTTGGAGAGGCTTCTTGAAGCTGGATACAAGAGAAGCATGTCTAATCTATGCAGCTCTTCATTTTGGCCTTCTTTTATCCTAGGAGATACCCTTCGTATTGTATTTCAGAATCTGCTATTGGAATCGAATGAGGCTATATTGCAGTGTTCTGAGAGAGTTTGGAGGCTTCTTGTTCAGTGTCCAGTTGAGGATTTGGAGACGGCGGCAAGATCTTATATGAATTCTTGGATAGAACTTGGATCTACCCCATTTGGTTCAGCATTAGATACCTCAAAAATGTTTTGGCCTGTTATCTTTCCACAAAAGAGTCAATCTAGAGCAGCCGCTAAAATGAGGGCTGTGACGGTGGAAAATGAAAATGGTGGGGGTCTTGTCTTGGATTCTACTAAAGGAATTAATCTACAAGAAAGAAATGGAAATGTCTCCATGGGTTCTGTCAAGATTGTTGTTGGTGCTGACGTTGATACATCAGTAACTAATACTAGAGTGATAACTGCTACTGCATTAGGAATTTTTGCTTCTAAGATGCCAGAGATTTCTATTAAAGATGTGATTGATCCGCTGTGGAATGCTCTTACCTCTTTGTCTGGCGTCCAGCGCCAGGTTGCGTCCATGGTATTTATTTCTTGGTTCAAGGAGATTAAAAGAATTCAATTATCTGTAAACCTTAATATTATTCCCGGGGTCCCAAATTATCTCAAAGACTGGCTGCTGGACTTATTGGCATGTTCTGATCCAGCATTCCCGACAAAGGATTCATTTCTTCCTTATGCTGAGCTTTCAAGAACATATTCAAAGATGCGTAGTGAGGCTGGTCAATTACTTAATGCTATGAAATGTTCTGGTATGTTTGATGACTTATTGTCAACTATGAAAGTTGAGTTGGAGAGCTTGAGTGTGGATGATGCCATTAATTTTGCATCAAAAGTTCCGGCTTTGTCTAGTGAAACTGCTGGGAATGAGTCCTTGGGAAGAAACGTTATGGATGATATTGAGTCATCAAAACAGAGACTCCTGACAACTTCTGGCTATTTAAAATGTGTTCAGAGCAATTTGCACGTTACGGTTTCATCCGCAGTTGCGGCTGCAGTTGTCTGGATCTCAGAATTTCCATCACGCCTCACCCCAATTATTTTGCCTTTGATGGCTTCAATAAAACGAGAGCAGGAGGAAATACTGCAAATGAAGTCAGCTGAGGCACTGGCTGAGCTTATGTATCACTCTGTTGAACGTAGACCTTGCCCAAATGATAAATTAATTAAGAATATTTGTGGCTTGACTTGTATTGATCCCTCTGAGACACCTCAAGCTGAATTTATTAGATCCATGGACAGTATTGATGATCAAGGTCTCATGTCCTTTGGAGCTTCTGGGGGTAGACAGAGATCGAAGGCCCATGTGCTGGCTGGTGAAGATCGATCAAAGGTTGAGGGCTTTATCAGTAGACGTGGATCTGAACTCTCACTGAGGTTTCTATGTGAGAAGTTTGGGGTTTCATTGTTTGATAAGCTTCCTAAGCTGTGGGATTGCCTTACTGAGGTGCTTAAGCCTAGCTCTGCTGAATCTCTTGCTGCTTCTGAAAAAGAAGTCACTTTGGTTATTGAGTCTGTCAGCAATCCCCAGACCTTGATTAACAATATTCAGATGGCACTTCAGGTGGTACGCTCTATTTCTCCCCTCCTGCACGAGGATTTGAAGCCAAAATTGTTGACACTTCTCCCTTGCATTTTCAAATGTGTTAAGCATCCTCATGTTGCTGTTAGATTAGCTGCTTCACGCTGCATTACTTCAATGGCCAGGTCAATGACTTTGAAAGTTATTGGAGATGTGGTTGAAAATGCTGTCCCTATGTTGGCAGATGCTTCATCAGTTCATGCCCGGCAAGGAGCTGGCATGCTGATAAGTTTTCTTGTTCAGGGGCTCGGTGTTGAGCTGGTCCCTTATGCTCCTCTCTTGGTAGTTCCACTTCTTCGGTGTATGAGTGATTGTGATCAGTCTGTTAGACAGAGTGTTACACATAGTTTTGCCACTCTTGTACCTTTACTTCCTTTAGCACGGGGCCTTCCACCACCTCTTGGTTTAGGGGAGGATTTATCCAGAAACACAGAAGATGTAAAATTTTTGGAGCAACTACTTGACAATTCTCATATTGAAGACTATCAGTTGTGCACTGAATTGAAAGTAACACTGAGAAGGTATCAACAGGAAGGTATAAATTGGTTGGCTTTCTTGAAACGTTTCAAGCTTCATGGAATTTTATGTGATGACATGGGGCTTGGTAAAACTCTTCAAGCATCAGCAATTGTGGCATCTGAAATAGCTGAGCATCAAAGGCTGAATGAGAATGAGGAGCTTCTTCCGTCCTTAATCATTTGTCCATCAACACTTGTTGCACATTGGGCTTTTGAGATAGAGAAATATATTGATGTTTCTATTGTATCTACTCTTCAATATTTTGGTTCTGCTCAGGAGCGGATGTGTATTAGAGATAATTTTTGCAAGCACAATGTCATCATTACATCATATGATGTTGTCCGTAAAGATATTGATTATCTAGGTCAGCTGCAGTGGAATTACTGCATTTTAGATGAAGGACATATAATCAAGAATGCTAAGTCCAAAGTAACTCTTGCTGTAAAGCAGTTGAAAGCCCACCACCGCTTGATATTGAGTGGAACACCAATACAGAATAACATCATGGACTTGTGGTCCCTTTTTGATTTTCTAATGCCAGGATTTCTTGGTACTGAGAGACAGGAGTTGTTATGGTTATGGTGTGTTAATTTGGTATGCTACGGTCTTATGGTTTGGATTGAGTTTTTTCTACATGATGCTACTAAAGTCCATGATTACTCCCTGCGAAACAAGTGGGAGAATAAAAGTTTGGAAGAAAAGAAATTGTTTAAGATGAGTTGTTCTGCACATAGGTCTGTATCAGTCTTGTTTTATGCTCTTTAA 3465 0.4127 MLPELLGRVLPACKLGLDDPDDDVRAVAADALIPAAAAIVALQCQTLQSIVMLLWDILLDLDDLSPSTSRDRKAMQDNNVDFKLNVVGLVVGDYVMNLLAEFYSQDVMVPKMNQAFGLGDTEMGNLIGVGDSGSSDHDKSPYMLSMLAPRLWPFMRHSITSVRFSAIRTLERLLEAGYKRSMSNLCSSSFWPSFILGDTLRIVFQNLLLESNEAILQCSERVWRLLVQCPVEDLETAARSYMNSWIELGSTPFGSALDTSKMFWPVIFPQKSQSRAAAKMRAVTVENENGGGLVLDSTKGINLQERNGNVSMGSVKIVVGADVDTSVTNTRVITATALGIFASKMPEISIKDVIDPLWNALTSLSGVQRQVASMVFISWFKEIKRIQLSVNLNIIPGVPNYLKDWLLDLLACSDPAFPTKDSFLPYAELSRTYSKMRSEAGQLLNAMKCSGMFDDLLSTMKVELESLSVDDAINFASKVPALSSETAGNESLGRNVMDDIESSKQRLLTTSGYLKCVQSNLHVTVSSAVAAAVVWISEFPSRLTPIILPLMASIKREQEEILQMKSAEALAELMYHSVERRPCPNDKLIKNICGLTCIDPSETPQAEFIRSMDSIDDQGLMSFGASGGRQRSKAHVLAGEDRSKVEGFISRRGSELSLRFLCEKFGVSLFDKLPKLWDCLTEVLKPSSAESLAASEKEVTLVIESVSNPQTLINNIQMALQVVRSISPLLHEDLKPKLLTLLPCIFKCVKHPHVAVRLAASRCITSMARSMTLKVIGDVVENAVPMLADASSVHARQGAGMLISFLVQGLGVELVPYAPLLVVPLLRCMSDCDQSVRQSVTHSFATLVPLLPLARGLPPPLGLGEDLSRNTEDVKFLEQLLDNSHIEDYQLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASEIAEHQRLNENEELLPSLIICPSTLVAHWAFEIEKYIDVSIVSTLQYFGSAQERMCIRDNFCKHNVIITSYDVVRKDIDYLGQLQWNYCILDEGHIIKNAKSKVTLAVKQLKAHHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQELLWLWCVNLVCYGLMVWIEFFLHDATKVHDYSLRNKWENKSLEEKKLFKMSCSAHRSVSVLFYAL 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0937 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 874 1088 IPR027417 -
Lele09g0937 1154 Pfam HEAT repeat 741 769 IPR000357 GO:0005515
Lele09g0937 1154 SMART ultradead3 895 1091 IPR014001 -
Lele09g0937 1154 Pfam SNF2-related domain 917 1085 IPR000330 GO:0005524|GO:0140658
Lele09g0937 1154 PANTHER TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 1 69 IPR044972 GO:0003677|GO:0016887|GO:0017025
Lele09g0937 1154 Gene3D - 676 878 IPR011989 -
Lele09g0937 1154 Pfam Domain of unknown function (DUF3535) 222 679 IPR022707 -
Lele09g0937 1154 Gene3D - 879 1094 IPR038718 -
Lele09g0937 1154 SUPERFAMILY ARM repeat 3 937 IPR016024 -
Lele09g0937 1154 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 911 1081 IPR014001 -
Lele09g0937 1154 FunFam TATA-binding protein-associated factor BTAF1 643 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0937 Lele-ChrLele09 11291564 11301434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0937 895 1078 RAD5 or RAD16-like Gene Family AT3G16600 31.050 5.98e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lele09g0937 DUF3535 1.5e-98 No_clan