Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0935 ATGGGACGTTCGCCTTGTTGCGAGAAAGCCCACACAAACAAAGGCGCTTGGACCAAAGAAGAAGACCAACGCCTTATCGATTATATTCGCCTCCATGGCGAAGGCTCTTGGCGTTCTCTCCCAAAAGCTGCTGGATTGCTCAGATGCGGAAAGAGTTGCAGATTGAGATGGATAAATTACCTTCGTCCTGATCTCAAACGAGGAAATTTCACGCAAGAAGAAGACGACCTCATCATCAAGCTTCATAGTCTACTCGGAAACAAATGGTCTTTGATTGCGGCGCGATTACCTGGTAGAACCGACAATGAGATCAAGAATTATTGGAATACACATATAAAGCGCAAGCTCATCAGCGGTGGAATCAATCCCCAAACACACCGTCCGCTGAACGAAACCGCCGTCTCTGTAAAATCTACCGCCGAGTGGGACTTCAAGACCTCACCGGCGGCGGAAAACGACTTCGTCGTGAAGAAGCAGAAGCTGAAGCAGGATAGTGATAGATTCAATTGCATCGATTTCGGCAGGAATAAGGCGGTTGAGGAATTGAACAACACTAGTTATAGAACCTCTATAGAGGAAGAAGAACCGCCATTGCTGGAGCGAGATTCTTCGGTTCATGGTGCTGGTGGTGAGCCCAATCTGGAGCTCTCGATTGGTCTCGTGCCGTTTCACTCCGAGTCGGCTCGTACAGCGCAGGGGAAATTGGCTGAGTCAAAAATAGGGTTGGTCCGGTCGCCGGCAACGGAGACTCAAATGGCGGCGTGTCGGAGTTGGCAATTCCATTTTCAGAGGTAG 795 0.4956 MGRSPCCEKAHTNKGAWTKEEDQRLIDYIRLHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQEEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLISGGINPQTHRPLNETAVSVKSTAEWDFKTSPAAENDFVVKKQKLKQDSDRFNCIDFGRNKAVEELNNTSYRTSIEEEEPPLLERDSSVHGAGGEPNLELSIGLVPFHSESARTAQGKLAESKIGLVRSPATETQMAACRSWQFHFQR 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0935 264 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele09g0935 264 MobiDBLite consensus disorder prediction 189 210 - -
Lele09g0935 264 FunFam Myb transcription factor 68 137 - -
Lele09g0935 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele09g0935 264 FunFam MYB-related transcription factor 13 66 - -
Lele09g0935 264 Gene3D - 14 66 - -
Lele09g0935 264 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 178 - -
Lele09g0935 264 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lele09g0935 264 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele09g0935 264 SMART sant 13 63 IPR001005 -
Lele09g0935 264 SMART sant 66 114 IPR001005 -
Lele09g0935 264 CDD SANT 16 61 IPR001005 -
Lele09g0935 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele09g0935 264 Gene3D - 68 140 - -
Lele09g0935 264 CDD SANT 69 112 IPR001005 -
Lele09g0935 264 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele09g0935 264 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0935 Lele-ChrLele09 10978763 10979772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0935 1 132 MYB Transcription Factor Family AT4G09460 88.636 5.60e-87 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele09g0935 Myb_DNA-binding 2.7e-15 CL0123