Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0904 ATGGCACAACTCATCAAACTCACATTCGTAGTGATTCTTCTCTTGTCTCTCTTCTCGATTGATGCATTAGCTAACCAATCCTCGAACCGAGCTCGTTATCGTCGATATAATCCTCGAACCGTCGCCTACATAAAAGCCTCTTGCCAAACCACTTTGTACCCAAATCTCTGTCTTCACTGCTTATATAAATTTGCCAATTCAAATATTCAAAGCCCCCAACAATTAACTCATGTGGCTTTATCTGTGAGTCTACAACGAGCACTATACACAAGAGATTACTTGCTGCAAGTGGCCAAACAATTCAAGGCACTCAACAATGGTAATAATAATGGTAGGGATTATCTAGTTCTGCAAGATTGCTTGAAGCAGATCAATGATAGCATGGATCAGCTTGGTCTTTCGATAAAAGAGCTCGCGCGGTTGAATAAGATCCCAAACACTTTGATCAACGATGCTGTGTTGTGGCACATAAGCAACGTTGAGACGTGGGTGAGCACTGCCCTTACCGATGCCAGCACTTGTGTGGATTACTTCCCAGGTCGTAGGATGAGTAAGATGAAGGCTACAGTAAGGGGTAAAGTATTGAATGTTGCGCAAGTCACTAGCAATGCACTTGCCTTATTTCAGAAATATGCAACTAAGTACCGAGAAGCAGCACAAGCCAACAAGAGACCTTGA 678 0.4292 MAQLIKLTFVVILLLSLFSIDALANQSSNRARYRRYNPRTVAYIKASCQTTLYPNLCLHCLYKFANSNIQSPQQLTHVALSVSLQRALYTRDYLLQVAKQFKALNNGNNNGRDYLVLQDCLKQINDSMDQLGLSIKELARLNKIPNTLINDAVLWHISNVETWVSTALTDASTCVDYFPGRRMSKMKATVRGKVLNVAQVTSNALALFQKYATKYREAAQANKRP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0904 225 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 211 IPR006501 GO:0004857
Lele09g0904 225 CDD PMEI-like_3 46 213 - -
Lele09g0904 225 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 210 IPR035513 -
Lele09g0904 225 FunFam Pectinesterase inhibitor 3 39 212 - -
Lele09g0904 225 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 207 - -
Lele09g0904 225 Pfam Plant invertase/pectin methylesterase inhibitor 43 207 IPR006501 GO:0004857
Lele09g0904 225 SMART PMEI_2 39 207 IPR006501 GO:0004857
Lele09g0904 225 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 211 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0904 Lele-ChrLele09 7915800 7916477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0904 19 209 Carbohydrate Esterase AT3G14310 24.870 5.20e-14 68.6