Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0893 ATGGATTTTGACCTTGAAAACCCCTTCTCCAACTCTGATTCTCTCTCCTTCCTCTTCCTCACTGAACCTGACCACATCCCTCCCCAACACTACTTTCTCACTCTCCATTCCACCCAGCTTCACCTCTCCCTCAGAACCCAACTTATTTCTCTCATCTCTGAGTTGGCCTGTTCCTTCGATCCCCTCCTCTCCTACTTAGCTATCAACTACCTCGATCGCTTTCTCGCCACCCAACCCACACTGGAACAAAAGCCATGGACCCTCAAGCTTCTTGCAGTATCCTGCTTATCTCTAGCTGCAAAGATGATGAAAACAGATTTTTCCGTCACCGATGTTCAGGCGTTTCTGAATCAGGGTGATGGTGGTGGGATCATTTTTGAAGCACAAACCGTAAAGAGAATGGAAGCTTTGATCTTGGGAGCTTTACAATGGCGAATGCGTTCTATCACTCCCTTCTCTTTCATTCCTTTCTTCATCACTCTGTTCATGCTCAAAAACCCACCATTGAGGCAAGTTCTGAAAGATCGAGCGGCCCAGATTATATTCAAGTCACAAAGAGAGATAAAGCTTTTGGAATTCAAGCCTTCCATAATTGCTGCTTCAGCCCTCTTATATGCTTCTCATGAGCTGTTTCCTTTTCAATATCCATGCTTTCTTGCAGCAATTTCAGATTGTCCATACTGCTACAACGTTATACGAGACATTGCAATGGAAGGGTACGAATCTGTGTTGGACATGGTTTCTAGTTCAGACACACCAGTTAATGTGTTGGACCATCATTTTCTGAGCTCGGAAAGTGAAAGAACCGACGGAAATCCCGCCGTCGCCACCACCACCCTCCGGCAAGAGAAAGATCTCAAGAGAAGGAAAATTAACGATTACGGTGATAATCTAACGGTCCACATTTCTCAGGTCAAGAATGGCGAAGGCAGGGTATGTGCTGCATCTTCGTGTGCTTCCATGAACTACACAAGGAATTTTGGACCACTCATATGGCCTGATCTCTTATTCCCTATCCCCTCCTTTTCTGAAGTTGTATTCTTTGACCTCTTGACTATGGGTGAGGCATCCCTTGCGGGACTTAGATGGTGGAATAACAGACTTTTCTCTGCTTCTTAA 1119 0.4531 MDFDLENPFSNSDSLSFLFLTEPDHIPPQHYFLTLHSTQLHLSLRTQLISLISELACSFDPLLSYLAINYLDRFLATQPTLEQKPWTLKLLAVSCLSLAAKMMKTDFSVTDVQAFLNQGDGGGIIFEAQTVKRMEALILGALQWRMRSITPFSFIPFFITLFMLKNPPLRQVLKDRAAQIIFKSQREIKLLEFKPSIIAASALLYASHELFPFQYPCFLAAISDCPYCYNVIRDIAMEGYESVLDMVSSSDTPVNVLDHHFLSSESERTDGNPAVATTTLRQEKDLKRRKINDYGDNLTVHISQVKNGEGRVCAASSCASMNYTRNFGPLIWPDLLFPIPSFSEVVFFDLLTMGEASLAGLRWWNNRLFSAS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0893 372 CDD CYCLIN 44 139 IPR013763 -
Lele09g0893 372 Pfam Cyclin, N-terminal domain 15 146 IPR006671 -
Lele09g0893 372 Gene3D - 19 210 - -
Lele09g0893 372 PANTHER CYCLINS 16 233 IPR039361 -
Lele09g0893 372 SUPERFAMILY Cyclin-like 11 146 IPR036915 -
Lele09g0893 372 Gene3D - 28 147 - -
Lele09g0893 372 SUPERFAMILY Cyclin-like 130 225 IPR036915 -
Lele09g0893 372 Pfam Cyclin, C-terminal domain 149 216 IPR004367 -
Lele09g0893 372 FunFam D6-type cyclin 144 233 - -
Lele09g0893 372 SMART cyclin_7 46 140 IPR013763 -
Lele09g0893 372 SMART cyclin_7 153 241 IPR013763 -
Lele09g0893 372 FunFam D6-type cyclin 28 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0893 Lele-ChrLele09 7387463 7390961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0893 1 289 Core Cell Cycle Gene Families AT4G03270 43.770 1.94e-72 226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0893 09 7387463 7390961 Lele09g0893 09 7387463 7390961 ECH
Lele09g0893 09 7387463 7390961 Lele12g0432 12 12084633 12086550 hybridization