Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0875 ATGAACCGTTACTTAATACTATCAAGCTTTGCTTATGCTATACAGCTGTCGAGGTTTAAGGTGCAGACTAGGGGACTTGTGGAAGTTGCAGGATTTCACAATGGGACTCCAAAGTTGAATTTCATATGCAGAAGGAAGCTAATACTGACAATAAACATAGACGAGAACACTGAGAAAGATCTTCAGCTAGTAGTCGAAAGAGGCACCGATCTGCTGAACAAGGAGGGAGCATCAGCGGAGGTGGTGGACTTCACGTTCTACACCGACGTATCGGAGCCACAGGGACACTACGTCATCTTCTGGGAGATCAAAGGCCAAGTAGATGACAAGTTGCTTCACAAATGTTGCACACAAATGGACTTGTCCTTTGTCGACCATGGCTACGTTGTTTCCAGAAAGAAACAAGCCATTGGGCCTCTTGAACTCAGAATCTTTCAGAGAGGCACTTTCAAGAGAATTCTTGATCATTTTCTTTGCAAATGGGGCTACTCTCGGCCAGTTTAA 504 0.4464 MNRYLILSSFAYAIQLSRFKVQTRGLVEVAGFHNGTPKLNFICRRKLILTINIDENTEKDLQLVVERGTDLLNKEGASAEVVDFTFYTDVSEPQGHYVIFWEIKGQVDDKLLHKCCTQMDLSFVDHGYVVSRKKQAIGPLELRIFQRGTFKRILDHFLCKWGYSRPV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0875 167 Pfam GH3 auxin-responsive promoter 26 158 IPR004993 -
Lele09g0875 167 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 26 158 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0875 Lele-ChrLele09 7039421 7041200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0875 19 160 EF-hand Containing Proteins AT1G23160 31.818 5.59e-25 98.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1027 31 17256379 17262736 Lele09g0875 09 7039421 7041200 CCT
Lele32g0496 32 3101763 3105679 Lele09g0875 09 7039421 7041200 CCT
Lele09g0875 09 7039421 7041200 Lele09g0875 09 7039421 7041200 ECH
Lele09g0875 09 7039421 7041200 Lele12g0461 12 12502284 12506883 hybridization