Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0863 ATGTCGACTGCGAGTAACAGTGGCAAATCCACCGAGGGTGGCGGTGGAGAAAACCGAGATTGGGAGATTGAAAGGGGTAAAGGCATAGATTTGAGCGGTGAGAGGCGGCAATGGAAGCCAGTTTTTGAAGATGCTTCCATGTCGAACAGACCTCTGAAGAAAATCCGAAGCCCAGAACGTGAAAACTCAAACCAAACTCAATCCTCCGTTCCCATTCTACCACATCATCCTTCTTCGTCTTCTTCTTCCAGAATCGTCTTCCCTTTCGCCTTCGATCGTTCTCAACAGCCTCTGCAATTTCCCCATCACCAATTCGGCTCGCCTGCGTTTCGCCCACCGTTTACGCAAAATCTGCAGCAGATGATTTCTTTTGGCTCCCAACAACAACAACCGAACATGGGGTGCCCTCAATTCTTCGCCCAAGACTCTGCAATTGCACACCAGCAACATCATCATCAGCATCAGCATCAACAACAGCAGCAACTTCTTCGGTATTGCAGAGACTCATTGAATCTGAGTCCAAGAGGAAGGATGATGATGATGATGAACAGTGTTGGGCCGGACGGGAGGCCAATGTATCGGCCACCTCCTCAGCCTATAAACACTACGAAGCTTTACAGAGGAGTCAGGCAGCGTCATTGGGGAAAATGGGTGGCGGAGATTCGTCTTCCTCGAAACAGAACTCGCCTCTGGCTGGGAACATTCGACACAGCTGAAGATGCTGCTTTGGCTTATGATCGCGAGGCCTTTAAGCTCAGAGGAGAGAATGCTCGGCTCAATTTCCCAGAGCTCTTCCTTAATAAGGATAAGCCATCGGCAACAGCAGCTCCAGATTCATCTGCTTCTTCTCCGGCGAAGCAAACTGACTCTGTTGCAGAAGGTTTTACTCCGGAAGCTCCAATTGCGGAGGAGAAGCCTCCGCAACCGCCGCCACCGGACGAGAGCACCGACAATGATTCTGGAATTGGGTCGAGTGATGCTACAATGAGCGACGAAGTTCAGGCTGCGTCTAATACTGGAACAGGGGAGGGCACTTCGTCGGCAGCGTCGCAAGAACTGGTTTGGGGAGAAATGGCGGCTTGGTTCAATGCAATTCCGGCGGGTTGGGGTCCGGGTAGCCCGGTGTGGGATGATTTGGACACGTTTCAGTCACAACTTCCATTTTTCAATCCCAATCACCAAGAATTCAATGATGCAGATCATCACAGACAGCAAGAAAATAATACAGGTCCATCAGATTCTTCCACTTCTTCCTCTTCTTGTCCCGTAAGACCCTTCTTCTGGAAAGGTCAAGATTGA 1299 0.5027 MSTASNSGKSTEGGGGENRDWEIERGKGIDLSGERRQWKPVFEDASMSNRPLKKIRSPERENSNQTQSSVPILPHHPSSSSSSRIVFPFAFDRSQQPLQFPHHQFGSPAFRPPFTQNLQQMISFGSQQQQPNMGCPQFFAQDSAIAHQQHHHQHQHQQQQQLLRYCRDSLNLSPRGRMMMMMNSVGPDGRPMYRPPPQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKPSATAAPDSSASSPAKQTDSVAEGFTPEAPIAEEKPPQPPPPDESTDNDSGIGSSDATMSDEVQAASNTGTGEGTSSAASQELVWGEMAAWFNAIPAGWGPGSPVWDDLDTFQSQLPFFNPNHQEFNDADHHRQQENNTGPSDSSTSSSSCPVRPFFWKGQD 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0863 432 MobiDBLite consensus disorder prediction 386 432 - -
Lele09g0863 432 FunFam Ethylene-responsive transcription factor 2 204 263 - -
Lele09g0863 432 Pfam AP2 domain 206 254 IPR001471 GO:0003700|GO:0006355
Lele09g0863 432 ProSiteProfiles AP2/ERF domain profile. 205 262 IPR001471 GO:0003700|GO:0006355
Lele09g0863 432 PRINTS Ethylene responsive element binding protein signature 206 217 IPR001471 GO:0003700|GO:0006355
Lele09g0863 432 PRINTS Ethylene responsive element binding protein signature 228 244 IPR001471 GO:0003700|GO:0006355
Lele09g0863 432 SUPERFAMILY DNA-binding domain 205 263 IPR016177 GO:0003677
Lele09g0863 432 MobiDBLite consensus disorder prediction 273 290 - -
Lele09g0863 432 MobiDBLite consensus disorder prediction 1 81 - -
Lele09g0863 432 CDD AP2 204 264 IPR001471 GO:0003700|GO:0006355
Lele09g0863 432 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 8 379 - -
Lele09g0863 432 MobiDBLite consensus disorder prediction 270 328 - -
Lele09g0863 432 SMART rav1_2 205 268 IPR001471 GO:0003700|GO:0006355
Lele09g0863 432 MobiDBLite consensus disorder prediction 61 81 - -
Lele09g0863 432 MobiDBLite consensus disorder prediction 15 41 - -
Lele09g0863 432 Gene3D AP2/ERF domain 205 263 IPR036955 GO:0003700|GO:0006355
Lele09g0863 432 MobiDBLite consensus disorder prediction 408 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0863 Lele-ChrLele09 6914067 6915365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0863 1 378 AP2-EREBP Transcription Factor Family AT2G20880 40.464 8.46e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele09g0863 AP2 3.1e-13 CL0081