Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0859 ATGGCTATTGCCGGCGAACATGGTCAACTCAGGGACCGAGGTCAAATCCCAGTCATTTACCGACGAACACCATGTAAATATCGAGGCAAAAACATTGCCTTCCAGGTGAATGAAGGTTCTACGCCCTTTTGGCTTTCACTTTTGGTGGAATTTGAGGATGGAGAAGGAGATATAAACTCTATGCATATTCAAGAAGCAGGGTCTATAGAGTGGCTAGAGATGAATCATCTGTGGGAAGAAGAAGAAGCACCGACAAGTGCGCGAGAACCAAAGGGTTTCATAGGTAGAGCCAAGTTCCATATTGCAAAAGCAGAGTTTTGTGGGCTTGAGCTTTCCCTTCTTTGTTTGCCATTGTTACTGTATTAA 366 0.4426 MAIAGEHGQLRDRGQIPVIYRRTPCKYRGKNIAFQVNEGSTPFWLSLLVEFEDGEGDINSMHIQEAGSIEWLEMNHLWEEEEAPTSAREPKGFIGRAKFHIAKAEFCGLELSLLCLPLLLY 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0859 121 PANTHER EXPANSIN-B3 1 80 - -
Lele09g0859 121 Gene3D - 24 94 IPR036749 -
Lele09g0859 121 SUPERFAMILY PHL pollen allergen 30 79 IPR036749 -
Lele09g0859 121 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 43 78 IPR007117 -
Lele09g0859 121 PRINTS Major pollen allergen Lol pI signature 34 49 IPR005795 GO:0005576|GO:0019953
Lele09g0859 121 PRINTS Major pollen allergen Lol pI signature 2 17 IPR005795 GO:0005576|GO:0019953
Lele09g0859 121 PRINTS Major pollen allergen Lol pI signature 50 65 IPR005795 GO:0005576|GO:0019953
Lele09g0859 121 Pfam Expansin C-terminal domain 32 79 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0859 Lele-ChrLele09 6891473 6893160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0859 1 78 Expansin Gene Family AT2G20750 58.974 2.60e-29 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0859 09 6891473 6893160 Lele09g0859 09 6891473 6893160 ECH
Lele09g0859 09 6891473 6893160 Lele11g0869 11 8724118 8725675 hybridization
Lele09g0859 09 6891473 6893160 Lele12g0473 12 12689289 12690893 hybridization