Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0853 ATGCGGTCGCCGGCGTTATTCCATCGTCGCTCACATGCTATCGTTTACGGCTCGCCCTCCGCGAAAGCTGCTGCACTTGTGGATCTGGCTGAAGATGGCGTCGGCATCCCAGAGCAAATACTCTATTCGTCGGAATTTCAGAGTTCCGCTAGATTTTACTTTATATTTACTAAATTAAACTTTCTATGGTCACTTGGTTACTTTGCCCTGCTAGTCCTGAATTTCCTCGAGAAACCCTTGTGGTGTGAAAAGTATACCGCTTATTCTTGCGACGATAGAGTGTATTTCTTCCTGGGACAGCTACCATATCTAACTGGTGCAGAATGTGTTGTGTATGAGGGTATAACTCTTCTTGTGCTTATTGTGCATACCTTTTTCCCGATATCCTATGAAGGCTCCCGTATATATTGGAAAAAAATTGTTAATCAATTGAAGGTATTGTGTCTGTTAGTTCTGGTTGCTGATATGGTGGTTTATGCTCTGTATTTGTCTCCGGCTACTGTTTATTCTTTACCTGTCAGATTTGCACCTTATGTCAGGGTTGTTCTTTTCATTTTACATATTAGGGAATTACGAGCAACCATTACTATCTTAGCTGGAATGCTTGGCACATACCTGAATGTCCTGGCTTTGGGGCTTCTCTTTCTTCTTTTCTCAAGTTGGTTGGCCTATGTGATGTTTGAAGATACACAACAGGGGAAAATAATATTCACTTCCTATGGCACCACGTTATATCAGATGTTTGTTTTATTTACCACATCCAATAATCCAGATGTTTGGATTCCTGCATACAAGGCTTCACGTTGGTATTGCCTGTTTTTTGTTCTCTTTGTGCTGTTGGGGGTTTACTTTGTCACAAACTTGGTCCTTGCCGTTGTTTATGATAGTTTCAAGAGTGAGCTTGCAAAACAAGTTTCTGAGATGGACCGAATGAGAAGAAATATGTTGGGGAAAGCATTTGATCTATTAGATAATGATCATGTTGGGTATCTAAACAAAGGACAATGCATTGAACTCTTTCATGAGCTGAACAAGTATAGGACTTTGCCAAAGATTTCCCAGGAAGAATTTGAGTTGATATTTGATGAGCTGGACGATACTCGTGATGTAAAGCTCAACAAGGATGAATTTGCTGATATTTGCAATGCCATTGGTTTCAAGTTCCAAAAGGAGGATAGTCTATCTTACTTTGAGTATTTACCATTCTACCATGCTGCCATCTCCAAGAAGTTGAAAGCATTTGTCCGGAGCCCCAAGTTTGGATACCTAATATCCTTCATTCTAATATTGAATCTGATTGCTGTTATAACTGAGACAACGCTTGATATACAAAATAATTCTGCTCAAAAGGTTTGGCAAGTGGTTGAATTTGTTTTTGGGTGGATATATGTAATAGAAATGGCTTTAAAAGTTTATGCATATGGATTCGAGAATTATTGGCGGGATGGTCAGAATCGTTTTGACTTTGTGATCACATGGGTAATTGTCATTGGAGAAACTATAACTTTTGCTATACCTGATGGACTGGATTTTTTCTCAAATGGAGAATGGATTCGATACCTTCTTCTTGCAAGAATGTTGAGGTTGATAAGGCTCCTAATGCATGTCCCGCAATACCGAGCCTTTGTGGCAACCTTCCTAACTCTCATACCAAGTTTGATGCCATACCTTGGAACCATATTTTGTGTCTTATGTATTTATTGCTCCCTTGGTGTACAGATCTTCGGTGGAATTGTCAATGCGGGAAATCCCAAATTGGAGGCAACAGGTCTTGCTGACAATGATTATGTGATCTTTAATTTCAATGATTATCCAAATGGAATGGTTACACTTTTCAATTTGCTAGTCATGGGAAACTGGCACATATGGATGCAGAGCTACAAGGAACTAACAGGGACTTCTTGGACCTATATTTACTTCATTAGCTTCTACTTAATAACTGTTCTGCTGCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTTGAGACGCCTGCTGATACTAGCGAAGAAGATGACAAGGAAGCTGAAGGAGAGAAACATCGAAGACGACGTATTGGCACCAAAACACGTAGCCAAAGGGTTGATGCTCTTCTTCATCATATGTTGAGCTCTGAGTTATGTCAAGCACAGCCTTCCGATCCATAA 2169 0.4002 MRSPALFHRRSHAIVYGSPSAKAAALVDLAEDGVGIPEQILYSSEFQSSARFYFIFTKLNFLWSLGYFALLVLNFLEKPLWCEKYTAYSCDDRVYFFLGQLPYLTGAECVVYEGITLLVLIVHTFFPISYEGSRIYWKKIVNQLKVLCLLVLVADMVVYALYLSPATVYSLPVRFAPYVRVVLFILHIRELRATITILAGMLGTYLNVLALGLLFLLFSSWLAYVMFEDTQQGKIIFTSYGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLFVLLGVYFVTNLVLAVVYDSFKSELAKQVSEMDRMRRNMLGKAFDLLDNDHVGYLNKGQCIELFHELNKYRTLPKISQEEFELIFDELDDTRDVKLNKDEFADICNAIGFKFQKEDSLSYFEYLPFYHAAISKKLKAFVRSPKFGYLISFILILNLIAVITETTLDIQNNSAQKVWQVVEFVFGWIYVIEMALKVYAYGFENYWRDGQNRFDFVITWVIVIGETITFAIPDGLDFFSNGEWIRYLLLARMLRLIRLLMHVPQYRAFVATFLTLIPSLMPYLGTIFCVLCIYCSLGVQIFGGIVNAGNPKLEATGLADNDYVIFNFNDYPNGMVTLFNLLVMGNWHIWMQSYKELTGTSWTYIYFISFYLITVLLLLNLVVAFVLEAFFAEMELETPADTSEEDDKEAEGEKHRRRRIGTKTRSQRVDALLHHMLSSELCQAQPSDP 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0853 722 Gene3D - 542 704 - -
Lele09g0853 722 FunFam Two pore calcium channel protein 1 543 701 - -
Lele09g0853 722 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 7 718 IPR044581 GO:0005245
Lele09g0853 722 Pfam EF-hand domain pair 316 380 IPR002048 GO:0005509
Lele09g0853 722 Gene3D - 190 296 - -
Lele09g0853 722 FunFam Two pore calcium channel protein 1 410 542 - -
Lele09g0853 722 SUPERFAMILY EF-hand 301 383 IPR011992 -
Lele09g0853 722 MobiDBLite consensus disorder prediction 674 698 - -
Lele09g0853 722 Coils Coil 294 314 - -
Lele09g0853 722 Pfam Ion transport protein 118 299 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele09g0853 722 Pfam Ion transport protein 420 664 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele09g0853 722 Gene3D - 409 541 IPR027359 -
Lele09g0853 722 FunFam Two pore calcium channel protein 1 190 301 - -
Lele09g0853 722 SUPERFAMILY Voltage-gated potassium channels 417 663 - -
Lele09g0853 722 ProSiteProfiles EF-hand calcium-binding domain profile. 352 387 IPR002048 GO:0005509
Lele09g0853 722 Gene3D - 297 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0853 Lele-ChrLele09 6832332 6843668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0853 9 720 Ion Channels AT4G03560 69.705 0.0 1046