Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0846 ATGGGTTCTGAATCGGCCAGCAGGTTTACAGGCTTTTTGATCTTCATCATGGTCACATGGCTTCTTTTCTCGCCATCGTCTCAAGCACGCGAGTTTTACGTCGGCGGCAAAGATGGCTGGGTAACGAAGCCTTCGGAAGACTACCATCACTGGGCTCAAAGAATGAGGTTTCAAGTTAATGACACTCTCTTTTTCAAGTACCAGAAAGGATCTGATTCGGTTTTGGTGGTGAAGAAGGAGGATTACGATTCGTGCAACATCAAAAATCCGTTGCAGAAGATGGAGGATGGCGATTCGACTTTCGTTCTTTATAGATCGGGTCCCTTCTACTTCATCAGTGGGAAATCTGAGCGTTGCCAAAAGGGTCAAAAACTGATAGTCGTCGTTATGGCTGTGAGAGACAAGCCTCCTCGTCAGACACCTCCTACTCCGGCACCATCTCCGGCAGACAATACGCCGAAAGCCGCCTCGCCAGCTCCGTCCCTGTCGAAGAATTCGGGCTCATGCCTGAGGCTTAGTGGTTCAGTAGTGGGAATATTGACTTTTGGGGTTAGCATTGGGATGAGCTTCATCTTTGGGGGCATTGGTGGGTTGGTTTTTTAG 603 0.4892 MGSESASRFTGFLIFIMVTWLLFSPSSQAREFYVGGKDGWVTKPSEDYHHWAQRMRFQVNDTLFFKYQKGSDSVLVVKKEDYDSCNIKNPLQKMEDGDSTFVLYRSGPFYFISGKSERCQKGQKLIVVVMAVRDKPPRQTPPTPAPSPADNTPKAASPAPSLSKNSGSCLRLSGSVVGILTFGVSIGMSFIFGGIGGLVF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0846 200 MobiDBLite consensus disorder prediction 135 165 - -
Lele09g0846 200 FunFam Early nodulin-like protein 1 29 134 - -
Lele09g0846 200 Pfam Plastocyanin-like domain 40 123 IPR003245 GO:0009055
Lele09g0846 200 MobiDBLite consensus disorder prediction 137 153 - -
Lele09g0846 200 Gene3D - 28 133 IPR008972 -
Lele09g0846 200 PANTHER BLUE COPPER PROTEIN 31 147 IPR039391 GO:0009055
Lele09g0846 200 ProSiteProfiles Phytocyanin domain profile. 30 131 IPR003245 GO:0009055
Lele09g0846 200 SUPERFAMILY Cupredoxins 29 130 IPR008972 -
Lele09g0846 200 CDD OsENODL1_like 30 130 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0846 Lele-ChrLele09 6711917 6712622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0846 8 172 Phytocyanin Superfamily AT4G28365 49.102 1.97e-52 165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0846 09 6711917 6712622 Lele30g0843 30 12510693 12511666 CCT
Lele09g0846 09 6711917 6712622 Lele32g0546 32 3385064 3386085 CCT
Lele09g0846 09 6711917 6712622 Lele11g0853 11 8542686 8543391 hybridization