Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0840 ATGGATGAGATTAAACCGAAGACGGGGGTGAAGAGGGAGGCGTCTTTTGGGTTGGGGGGTTACGAGGAGAAGAAAAATGGATTCTTGCTGTTGGGGGAAGATGAGCAGAGGAAGAAGGTGTCCGTGAAGAAAGGGTCTGCCGCCGCGGCCGCCGGCGGAGGAGGAAGTGGTATGCGGTGTTGCCAGGCGGAGAACTGCATGGCAGAGCTGAGTGACGCGAAACGGTATTATAAGAGGCATAAAGTGTGCGAATATCATGCCAAGGCTCAGGAAGTTATGGTTTGTGGCATCCGACAACGTTTTTGTCAGCAATGCAGCAGATTCCATGAGTTGGGTGAGTTTGATGAGACGAAAAGGAGTTGCAGGAGGAGATTGGCTGGGCACAATGAAAGAAGGAGGAAGAGTTCAGTGGGTGAGAGTCAAGGAGCAGGGTCGAGCCAGAAAAGAACAGGATTGAAGGACAGGGTCGTTTGTGGTGGTGGAGATGAAAGAGCCAGAGTTCAGATCATCATATAA 516 0.5136 MDEIKPKTGVKREASFGLGGYEEKKNGFLLLGEDEQRKKVSVKKGSAAAAAGGGGSGMRCCQAENCMAELSDAKRYYKRHKVCEYHAKAQEVMVCGIRQRFCQQCSRFHELGEFDETKRSCRRRLAGHNERRRKSSVGESQGAGSSQKRTGLKDRVVCGGGDERARVQIII 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0840 171 Pfam SBP domain 61 134 IPR004333 GO:0003677
Lele09g0840 171 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 44 146 IPR044817 GO:0003677
Lele09g0840 171 ProSiteProfiles Zinc finger SBP-type profile. 58 135 IPR004333 GO:0003677
Lele09g0840 171 MobiDBLite consensus disorder prediction 125 157 - -
Lele09g0840 171 Gene3D - 51 122 IPR036893 GO:0003677|GO:0005634
Lele09g0840 171 SUPERFAMILY SBT domain 59 137 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0840 Lele-ChrLele09 6667261 6667978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0840 55 169 SBP-box Gene Family AT1G53160 57.391 3.25e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele09g0840 SBP 2.2e-30 No_clan