LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele09g0820	ATGGACGATAGTTTGGAGAGCCAATATGGATCTTCTTCTGACCCATCCATGAAAAATAAGGCAAAAAAATTGGTTGATGATCTTCAAGGAATCTTTACGAAGCTTCGATCTGCAAGAGAAGAGAATAGGTCTAATGATATAGTTATCTTTGAAGAGCAGGTGCATCATACGCTCCAAGAGTGGAAAGCAGAATTGAACCAGCCATCTCCAGCTTCCTCCTTAGCTGATGGAAATCTTGGATTATTTTCAGAGGAATTGGCCCAACTTTTGCAAGAAATTGAGGAAGACGATGCCACTAGTGAACTGGCGAAGAGTACACCATTGAAGACTGAGCCAGATCTTCATAACACCAATGAAACCAGTTATTCATCATATCAGGAAAAGGGTTCTGATGAGAACCAACAAGGTCATGCTCTGGAAGACTTTTACCAATATGAAGGCGCTACTTCAACTCCAAAGAGCCAAAATGCTGTTAATAACTTAGATATGATTACTCAATCGGATAATCATCAACTCAGTTTAAATCAAGATGTAAATTACTTCACAGGAGGCCATAAATCTGATTTAACTGAACAGTGCGATATATATCAGGAATACAGCCAAAACTCAGCAATAAAAAGCATGGAGCCGGATCAATTTATTTTAGATGAAGATTTTGATTGGAATGTGTTTGTCGGAGCTGATAATCTCCAACAGTCTGGAGAGGATATTTCGCCTAATATTCTTCCAAATATAAGCCCTCCTCCTTCTGCTTTTTTAGGCCCAAAATGTGCTTTATGGGATTGCTTTAGGCCTGCTCAAGGGTTAAAATGTTGCCAGGACTACTGCTGTAGTTCTCATGAGCTTTTGGCGAATAATGAGGGTCTTCCTGGCATGACTCCAATTTTGCGTCCTGGGGGCATTGGTGTTAAGGATGGTCCTTTGTTTGCTGCTGTTGATGCGAAGACACTGGGTAAGGAGGTGGGCATCCCTAATTGTGAAGGTGCTGCTTCAACAAAATCCCCCTGGAATGCTCATGAGTTATTTGATATTTCTCTTTTCGAGGGTGAAACGATGCGGGAATGGCTTTTTTTTGACAAGCCCAGAAGGGCTTTTGATAGTGGAAATAGAAAACAAAGATCACTGCCAGATTACAGCGGACGTGGTTGGCATGAATCAAGGAAGCAAGTGATGAAGGAAAATGGGGGACAGAAGAGGTCCTATTACATGGACCCTCAGCCACTGAGTTATCTTGAGTGGCATTTGTATGAATATGCGGTTGATAAGCATGATGGTTACGCATTATATAGACTGGAATTAAAGCTTGTGGATAAAAAGAAGAGTCCTAAAGGAAAAGTGACCAAGGAATCTCTTGCTGATATACAGAACAAGATGGGAAAGCTAACTGCAGATGTTCCAGGAAAAAAATGA	1410	0.4106	MDDSLESQYGSSSDPSMKNKAKKLVDDLQGIFTKLRSAREENRSNDIVIFEEQVHHTLQEWKAELNQPSPASSLADGNLGLFSEELAQLLQEIEEDDATSELAKSTPLKTEPDLHNTNETSYSSYQEKGSDENQQGHALEDFYQYEGATSTPKSQNAVNNLDMITQSDNHQLSLNQDVNYFTGGHKSDLTEQCDIYQEYSQNSAIKSMEPDQFILDEDFDWNVFVGADNLQQSGEDISPNILPNISPPPSAFLGPKCALWDCFRPAQGLKCCQDYCCSSHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVDAKTLGKEVGIPNCEGAASTKSPWNAHELFDISLFEGETMREWLFFDKPRRAFDSGNRKQRSLPDYSGRGWHESRKQVMKENGGQKRSYYMDPQPLSYLEWHLYEYAVDKHDGYALYRLELKLVDKKKSPKGKVTKESLADIQNKMGKLTADVPGKK	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele09g0820	469	PANTHER	TRANSCRIPTION FACTOR VOZ1	6	467	IPR039277	GO:0006355\|GO:0048578
	Lele09g0820	469	MobiDBLite	consensus disorder prediction	1	22	-	-
	Lele09g0820	469	MobiDBLite	consensus disorder prediction	97	134	-	-
	Lele09g0820	469	MobiDBLite	consensus disorder prediction	1	18	-	-
	Lele09g0820	469	MobiDBLite	consensus disorder prediction	103	132	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele09g0820	Lele-ChrLele09	6518420	6521194	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele09g0820	11	466	VOZ-9 Transcription Factor Family	AT1G28520	52.597	2.85e-151	438

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Lele09g0820		None	None	None