Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0815 ATGGCGCAATTGCCTCCCAAGATCCCAAACATGGCGCCGAATTGGCCTGATTTTTCTTCTCAACATCAGAAGATGCCTTCCCTTGCAAGTTTGTCGCCAAATAATGTTGCCGCCACCAACGCTGCGGCGACCACCACCTCCAACACCACTCATCAGAATCCTTCTTGGGTGGAGGAATTCCTTGACTTCTCGTCGGCCCGACGAGGGGCTCACCGGCGATCCGTGAGCGACTCCATTGCCTTCATTGAGGCTCCAATGCTGGACGATTGTCGTGGTAACTCCGGCGTGATTCCTCCGAGGTCGTCTGAGTTCGATAGATTTGATGATGACCAATTCATGTCTATGTTCACTGACGATTTATCCGGCGCTCCAATGCCTCCCACCTTGTCGTCCTCCAATCCTTCGAGCCCTTCCGATCATAACAGCATTAATGATGAGAAAGAAACCGGCCAAAACCAGAATCAACCGAAGGAGAAGAAAGAGCATGATCAGCAGCAGAAACAAGTGAAGAATGAATCAGATGAGGTTGAAAGCCAACATGAACAGGAAACTCAAGCTCCAAATAACACCAACACAACTTCTTCCGCTGACAAAATTACTGACCCTAAGAGAGTGAAACGAATCCTGGCAAACAGACAATCTGCACAAAGGTCACGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAACGAAGTGTAACTTCATTACAGGCCGAAGTTTCAGTTCTATCTCCAAGAGTTGCGTTTTTAGATCATCAACGATTGCTTCTAAATGTTGACAACAGTGCTCTGAAGCAAAGAATCGCCGCCCTTGCACAGGACAAGATCTTTAAGGATGCTCATCAAGAGGCTTTGAAGAGGGAGATAGAGAGACTGAGGCAAGTATATCACCATCAGAACCTCAAGAAAATGGAAAATAATGCTGCAGGGCCACCATCAATCCAACCACGTTCATCTCCAATACCAAACACAGAATGTAGCGCTAAGACTACAGAAAAGGAACAACTTCTTAATGCCTGA 1020 0.4696 MAQLPPKIPNMAPNWPDFSSQHQKMPSLASLSPNNVAATNAAATTTSNTTHQNPSWVEEFLDFSSARRGAHRRSVSDSIAFIEAPMLDDCRGNSGVIPPRSSEFDRFDDDQFMSMFTDDLSGAPMPPTLSSSNPSSPSDHNSINDEKETGQNQNQPKEKKEHDQQQKQVKNESDEVESQHEQETQAPNNTNTTSSADKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHHQNLKKMENNAAGPPSIQPRSSPIPNTECSAKTTEKEQLLNA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0815 339 MobiDBLite consensus disorder prediction 124 140 - -
Lele09g0815 339 MobiDBLite consensus disorder prediction 14 29 - -
Lele09g0815 339 Pfam bZIP transcription factor 203 247 IPR004827 GO:0003700|GO:0006355
Lele09g0815 339 Gene3D - 202 303 - -
Lele09g0815 339 MobiDBLite consensus disorder prediction 116 204 - -
Lele09g0815 339 FunFam Basic leucine zipper 61 202 275 - -
Lele09g0815 339 SMART brlzneu 199 263 IPR004827 GO:0003700|GO:0006355
Lele09g0815 339 Coils Coil 282 302 - -
Lele09g0815 339 MobiDBLite consensus disorder prediction 1 29 - -
Lele09g0815 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 206 221 IPR004827 GO:0003700|GO:0006355
Lele09g0815 339 MobiDBLite consensus disorder prediction 141 181 - -
Lele09g0815 339 PANTHER BASIC LEUCINE ZIPPER 34 1 323 - -
Lele09g0815 339 SUPERFAMILY Leucine zipper domain 203 257 IPR046347 GO:0003700|GO:0006355
Lele09g0815 339 MobiDBLite consensus disorder prediction 182 198 - -
Lele09g0815 339 MobiDBLite consensus disorder prediction 311 339 - -
Lele09g0815 339 MobiDBLite consensus disorder prediction 302 339 - -
Lele09g0815 339 Coils Coil 159 186 - -
Lele09g0815 339 CDD bZIP_plant_RF2 204 254 IPR044759 GO:0003700|GO:0006355
Lele09g0815 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 201 253 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0815 Lele-ChrLele09 6484076 6487013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0815 1 280 bZIP Transcription Factor Family AT3G58120 58.361 2.05e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele09g0815 bZIP_1 4e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0815 09 6484076 6487013 Lele09g0815 09 6484076 6487013 ECH
Lele09g0815 09 6484076 6487013 Lele11g0819 11 8295750 8298055 hybridization
Lele09g0815 09 6484076 6487013 Lele12g0525 12 13553978 13556322 hybridization