Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0812 ATGGGCATGAAGAGCACAGGAGGAGAGATAGTTCAGGTTCAAGGAGGCCACATTGTTCGATCCACTGGTAGAAAAGATCGTCACAGTAAGGTTTACACTTCAAAAGGCCCTCGTGACCGTAGGGTTCGACTCTCAGCTCATACAGCCATTCAATTCTACGATGTTCAAGACCGTCTCGGCTATGACCGGCCCAGTAAGGCCGTGGATTGGCTCATCAAGAAGGCGAAATCCTCCATTGACAACCTCGCAGAGCTTCCTCCATGGAATCCAGCTACTACTAATACTGAAGAAGCTCCTGAAATAGGAATTGCGGAGGAAACAGAGCCTTCTGGTTACAACATTCAGCTTCAGAGGCAGTTTGGTGAGAACCCAGATAACCATTCTGGTTTTATTTCGTCGCAGATGGGAACTGATGCCATAGCTTTCTTCCCCACCACTACAGCTACTATGAGCTCCTCCATCAATTTTCAGAACTACCCAGGTGATATAATCACCAGAACTACCAACCCCAATGAAGATCTTGGACTTTCTCTTCATTCGTTTCAAGACCCAGGTTTGATTCATGGCCAATCATCACAAGGAGAAGCGAATCCTGCAGGATTTGTGACTTGGAACAACAATGACGCTTCTATGTTGGTGGGGCAAGGTTCGGCATTTTCTCAAAGGGGGACCCTTCAGTCCAGTTTTTCAGCATGGAATGACATTGCAATGACTTGTTCTTCAGAGCAACAGAACAAGTCCCAAGCTTCGATCTTTGGAAGCAGGTTTCTGTCTGATGGAATGGGAATTCCTGGATTCTGTATTCCCGCAAGAATTCAAGGTGAGGAGGACGATGGAATTGGTTCTGATCATAGGCCATCTTCTTCTGCTTCTCCTAATTCTCATCACTGA 891 0.4646 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSSIDNLAELPPWNPATTNTEEAPEIGIAEETEPSGYNIQLQRQFGENPDNHSGFISSQMGTDAIAFFPTTTATMSSSINFQNYPGDIITRTTNPNEDLGLSLHSFQDPGLIHGQSSQGEANPAGFVTWNNNDASMLVGQGSAFSQRGTLQSSFSAWNDIAMTCSSEQQNKSQASIFGSRFLSDGMGIPGFCIPARIQGEEDDGIGSDHRPSSSASPNSHH 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0812 296 Pfam TCP family transcription factor 23 93 IPR017887 -
Lele09g0812 296 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 253 IPR005333 GO:0003700
Lele09g0812 296 MobiDBLite consensus disorder prediction 273 296 - -
Lele09g0812 296 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0812 Lele-ChrLele09 6470313 6471203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0812 8 295 TCP Transcription Factor Family AT3G15030 40.458 1.90e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele09g0812 TCP 1.5e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0812 09 6470313 6471203 Lele09g0812 09 6470313 6471203 ECH
Lele09g0812 09 6470313 6471203 Lele11g0815 11 8284035 8285846 hybridization
Lele09g0812 09 6470313 6471203 Lele12g0528 12 13566232 13567430 hybridization