Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0806 ATGGAAGGTTTTGATTGGAGTTCACCAGCCGTTTGTGGAAATGCCTCAGAGAAAAGCAGTCATGGTTTTGCAGTTAATTCTGGTGTTATAGAAACTGGGTTTGCTTCATCTTCTTCTCTGGTGTTGGATAACCAGATGGTTCAAGAACGAAACAAGGGCTTGTCATCCTCTGAGAGAAGCGTCGCAGCTTTGAAGAACCATAGCGAGGCAGAACGAAGAAGAAGAGCAAGGATCAATGCTCATCTTGATACTCTTCGCACGGTTATTCCAGGTGCTAACAAGATGGACAAAGCATCGTTACTTGGTGAGGTGATCAGACATTTGAAAGAGCTAAAAGGGAATGCAGCAGAAGCTTGTGAAGGTTTAATGGTACCAAAGGACAGTGATGAGATAAGAGTTGAAGAGGAAGAAGTTGGCTCTAATGGTTTTCCTTATTCAATTAGGGCTTCTCTGAGTTGTGAGTATAAACCTGGGTTGTTGTCCGATATAAGGCAAGCACTTGATGCTCTTCATCTGATTATAATGAAGGCAGAGATTGCGACATTGGGAGGGAGGATGAAGAATGTGTTTGTGATAATAAGCTGTGAAGAGAATAACATCAACATTGAAGATTCTGAGTATAGACAGTTTCTTGCTGGTTCTGTTCATCAAGCTCTTAAGTCTGTGGTTGATAGATTCTCTACTTCACAGGATCTCTTAGGAATCAGAAAGAGGAGGAGGATTTCTGTAAGCGTTTTGGTGGTGCGTCGTTTCTGCCCGAGGCAAGGAGAGCTGAGAAAGACCTTCGTTCTCTTGAGTCTTCATCAATCTGTCGAAACAAAATCGCAACCTATTTCAACAAAATTCGATTCCTTCCTCTGA 861 0.4239 MEGFDWSSPAVCGNASEKSSHGFAVNSGVIETGFASSSSLVLDNQMVQERNKGLSSSERSVAALKNHSEAERRRRARINAHLDTLRTVIPGANKMDKASLLGEVIRHLKELKGNAAEACEGLMVPKDSDEIRVEEEEVGSNGFPYSIRASLSCEYKPGLLSDIRQALDALHLIIMKAEIATLGGRMKNVFVIISCEENNINIEDSEYRQFLAGSVHQALKSVVDRFSTSQDLLGIRKRRRISVSVLVVRRFCPRQGELRKTFVLLSLHQSVETKSQPISTKFDSFL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0806 286 Pfam Helix-loop-helix DNA-binding domain 66 111 IPR011598 GO:0046983
Lele09g0806 286 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 62 111 IPR011598 GO:0046983
Lele09g0806 286 ProSiteProfiles ACT domain profile. 148 225 IPR002912 -
Lele09g0806 286 PANTHER TRANSCRIPTION FACTOR BHLH30 35 241 IPR045847 GO:0003700|GO:0006355
Lele09g0806 286 SMART finulus 68 117 IPR011598 GO:0046983
Lele09g0806 286 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 117 IPR036638 GO:0046983
Lele09g0806 286 MobiDBLite consensus disorder prediction 51 72 - -
Lele09g0806 286 Gene3D - 58 119 IPR036638 GO:0046983
Lele09g0806 286 CDD ACT_UUR-ACR-like 150 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0806 Lele-ChrLele09 6399502 6401547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0806 59 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 43.085 1.55e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele09g0806 HLH 3.6e-11 No_clan