Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0794 ATGGCCCACTCGCCCACTAAGAATGCAAGACAAAATTTTGACCAAAAAATAAAAAACGGTGATCGGCTATCATCGTACATTGGCGCTGGCAAGTTTCGGAGTCGGACCCATCATATTGTCTGCCCTGAGAACCATTCCTTCCTCCTACCGCCGGGGGTTCTAACTAAAAGCGTAACCGCCTACGCTCCTCCAATCGCACTCCACCACCTCAGCACTGCGTCACTCATGGACTCCCCCACGGGAGCTCCGTCGCCCCCCTCCACTGCTCCGGCCCGGTCGTCGCCGTTTCCCGGAAGGGAAGACTGCTGGAGTGAGGACGCCACCTTCACTCTCATCGATGCTTGGGGTGAACGTCACCTTGAGCTCAATCGAGGAAACCTCCGTCAGAAGCACTGGCAAGAGGTCGCCGACGCCGTTAACGCCAATCATGGCCACGTGAAGAAGGCGCGCCGAACCGACGTCCAGTGCAAGAACCGCATCGACACTCTAAAGAAGAAGTATAAGATCGAGAAGAACAAGGTCATCGATTTCGACGGTAACTACACTAGCCCTTGGCCCTTCTTCACCCGCCTTGACGCTCTCATCGGCGATGCGTTTCCTGTTAAGAGACTTCCGCCGGCGATCGACAGTAGCCGCCGTAGCTCCCCTCCCTCGAAGTCTCCGGCATGGGTAATCTCACAGGTGCCTGTCGCCCCCCGATCCGGCACTCAGAAACGGCCGTCGTTGCCGGCGCCGGTGCCGGCAAACATGAAAGACTCGTCTTTCCGTCGGAACTTCTCTGCTTTTGCAGCGGCAGCAGCGGCAGCGGCAGCGGCCGATTCAGGGGATGCAAATAGTGACGATTCGGATGAGTCAAGGTCAAGTAGTGCCACCGGAAGTAGAAAGAGAGCAAGAGAAAGAGAGAAAAAGAGGGAAAACGATAGGGATTCAGAATTTGGGTACAGAGAGATGGCACAAGCAATAGAGAGGTTGGGGGAGATATACGAGAGAGTAGAGGCGGCGAAGCAAAGGCAAATGGTGGAGTTAGAGAAACAGAGGATGCAATTTGCTAAGGATTTGGAGTACCAGAGGATGGAGCTTTTCATGGAAACGCAGGTTCAGCTTCACAAAATCAAGCGCTCCAAGCGATCTTCCCGGGCTGACAGTTTCTCGTAG 1155 0.5481 MAHSPTKNARQNFDQKIKNGDRLSSYIGAGKFRSRTHHIVCPENHSFLLPPGVLTKSVTAYAPPIALHHLSTASLMDSPTGAPSPPSTAPARSSPFPGREDCWSEDATFTLIDAWGERHLELNRGNLRQKHWQEVADAVNANHGHVKKARRTDVQCKNRIDTLKKKYKIEKNKVIDFDGNYTSPWPFFTRLDALIGDAFPVKRLPPAIDSSRRSSPPSKSPAWVISQVPVAPRSGTQKRPSLPAPVPANMKDSSFRRNFSAFAAAAAAAAAADSGDANSDDSDESRSSSATGSRKRAREREKKRENDRDSEFGYREMAQAIERLGEIYERVEAAKQRQMVELEKQRMQFAKDLEYQRMELFMETQVQLHKIKRSKRSSRADSFS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0794 384 MobiDBLite consensus disorder prediction 279 311 - -
Lele09g0794 384 MobiDBLite consensus disorder prediction 273 311 - -
Lele09g0794 384 Gene3D - 103 169 - -
Lele09g0794 384 Pfam Myb/SANT-like DNA-binding domain 100 194 IPR044822 -
Lele09g0794 384 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 83 376 IPR044823 -
Lele09g0794 384 MobiDBLite consensus disorder prediction 76 100 - -
Lele09g0794 384 FunFam trihelix transcription factor ASIL2 103 169 - -
Lele09g0794 384 MobiDBLite consensus disorder prediction 205 249 - -
Lele09g0794 384 Coils Coil 317 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0794 Lele-ChrLele09 6280855 6284894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0794 79 373 Trihelix Transcription Factor Family AT3G14180 35.014 3.27e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele09g0794 Myb_DNA-bind_4 2.1e-24 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0794 09 6280855 6284894 Lele09g0794 09 6280855 6284894 ECH
Lele09g0794 09 6280855 6284894 Lele11g0799 11 8079969 8080985 hybridization
Lele09g0794 09 6280855 6284894 Lele12g0543 12 13761516 13762717 hybridization