Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0793 ATGTACCATACCAACTCGTTCTTGTTGATTTTTTTGGCCAATTCCCTCAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCTTTTGGTCGGCGTAGTCGGAGAAGGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGGGCGCGGTCCATGCTTAGCGGTGATAGGAAAACATTTAGAGATTTTGCTGATGACGGGGCTACATCAAGGTCAGATGGTGCTCCCTCATCAGAAGCTCGTAGGATCAGAAGAAGAAGCATCAGCATTACACCAGAAATTGGTGACGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAGAATCGTCTTTTGAGGGAGCAGAGGGATGATTCATCCTTCTCACATTCTCCAACTGATAGAAGTAGCGGTAGTAATCTTCAGAAAAATGTTTCAAATTTCCATCTTGGTCATGATGCAAGATCTTCTTTATATTCTCTTAATCATGACCAAGAAACTTCTCAAAAGGCAATGTCATTACCCTCTTCACCACATGAATATAGGGGTGAAGCATCTGGGAGAAGTGGACCTTCAGGATATGGAGTAAGTAATGAGCTCGAAGCAACATGGAACAAAGTCCTCGAGTCTCCAATGTTCAATAATAAATCTCTGTTACCATATGAAGAATGGAATATTGACTTCTCAGAACTAACTGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGAGAAGTATTCCGAGGCATATGGAATGGAACAGATGTTGCCATAAAGGTTTTTCTGGAGCAAGATTTAACTACTGAAAACATGGAAGATTTCTGCAATGAGATAACAATTCTCAGCCGGCTTCGACATCCTAATGTTATTTTATTTCTTGGTGCATGCACAAAGCCTCCACGTTTGTCAATGGTTACTGAGTATATGGAGATGGGATCTTTGTATTACTTGATCCATTCGAGTGGTCAAAAGAAGAAGCTTAGTTGGCGGAGAAGACTGAAGATGTTACGGGATATATGCAAGGGGTTGATGTGCATTCATCGTATGAAGATAGTTCACCGTGACCTGAAAAGTGCCAATTGTCTTGTGAATAAGCCTTGGACTGTGAAGATCTGTGATTTTGGGCTTTCAAGAATAATGACAGATTGTCCCATGAAAGATTCTTCATCGGCGGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGAAACGAACCATTCACTGAAAAATGTGACATCTTTAGCCTGGGGGTGATAATGTGGGAGCTTTGCACTTTAAATAGGCCCTGGGCAGGTGTACCGCCGGAGAGGGTAATTTATGCCGTTGCTAACGAGGGATCCAGACTAGAGATTCCCGAGGGTCCACTGGGCAGGCTGATTACAGAATGTTGGGCAGAACCTCACGAACGGCCAAGTTGTGAAGACATCCTTTCTCGTTTGCTTGACTGCGAATACTCATTGTGCTAA 1476 0.4343 MYHTNSFLLIFLANSLSLSHSEPNIATAFGRRSRRRVIAEQRTASSSPEHPSFRARARSMLSGDRKTFRDFADDGATSRSDGAPSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQRDDSSFSHSPTDRSSGSNLQKNVSNFHLGHDARSSLYSLNHDQETSQKAMSLPSSPHEYRGEASGRSGPSGYGVSNELEATWNKVLESPMFNNKSLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTTENMEDFCNEITILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHSSGQKKKLSWRRRLKMLRDICKGLMCIHRMKIVHRDLKSANCLVNKPWTVKICDFGLSRIMTDCPMKDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWAGVPPERVIYAVANEGSRLEIPEGPLGRLITECWAEPHERPSCEDILSRLLDCEYSLC 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0793 491 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 88 483 - -
Lele09g0793 491 Gene3D Phosphorylase Kinase; domain 1 228 313 - -
Lele09g0793 491 SMART serkin_6 235 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0793 491 ProSiteProfiles Protein kinase domain profile. 235 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0793 491 ProSitePatterns Protein kinases ATP-binding region signature. 241 262 IPR017441 GO:0005524
Lele09g0793 491 MobiDBLite consensus disorder prediction 119 149 - -
Lele09g0793 491 MobiDBLite consensus disorder prediction 40 59 - -
Lele09g0793 491 MobiDBLite consensus disorder prediction 119 134 - -
Lele09g0793 491 Gene3D Transferase(Phosphotransferase) domain 1 314 489 - -
Lele09g0793 491 Pfam Protein tyrosine and serine/threonine kinase 236 483 IPR001245 GO:0004672|GO:0006468
Lele09g0793 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 354 366 IPR008271 GO:0004672|GO:0006468
Lele09g0793 491 FunFam Serine/threonine-protein kinase isoform 1 225 313 - -
Lele09g0793 491 MobiDBLite consensus disorder prediction 167 198 - -
Lele09g0793 491 MobiDBLite consensus disorder prediction 68 94 - -
Lele09g0793 491 MobiDBLite consensus disorder prediction 135 149 - -
Lele09g0793 491 CDD STKc_MAP3K-like 241 483 - -
Lele09g0793 491 SUPERFAMILY Protein kinase-like (PK-like) 210 483 IPR011009 -
Lele09g0793 491 PRINTS Tyrosine kinase catalytic domain signature 309 322 IPR001245 GO:0004672|GO:0006468
Lele09g0793 491 PRINTS Tyrosine kinase catalytic domain signature 395 405 IPR001245 GO:0004672|GO:0006468
Lele09g0793 491 PRINTS Tyrosine kinase catalytic domain signature 414 436 IPR001245 GO:0004672|GO:0006468
Lele09g0793 491 PRINTS Tyrosine kinase catalytic domain signature 348 366 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0793 Lele-ChrLele09 6270833 6279369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0793 12 491 MAP Kinase Kinase Kinase AT3G58640 74.793 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lele09g0793 PK_Tyr_Ser-Thr 5.6e-62 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0793 09 6270833 6279369 Lele09g0793 09 6270833 6279369 ECH
Lele09g0793 09 6270833 6279369 Lele11g0798 11 8065803 8076839 hybridization
Lele09g0793 09 6270833 6279369 Lele12g0544 12 13764483 13781834 hybridization