Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0790 ATGGAAGCGAGACCTAATAAGAAACGGTCATTCTTGGACTTGATTAATGAAGAAGCTGTGGTCGGTGACCATGGAGAGACGAGTATTATTGATGATAGATCGTGGTCTCCGCAAGGGAATATGAGCAGCAATAACTCAAGCACAGATCAAGTGAGAGAACGAACAACGAGTGTTAGGCAATATGTGAGGACTAAAATGCCAAGGCTTCGTTGGACTCCTGATCTTCATCTCGCTTTTGTTCTTGCTGTTGAGAGGCTTGGTGGACAACAAAGAGCATCTCCCAAGCTGGTTCATCAGCTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAAAGTCATTTGCAGATGTATCGAAGTAAAATGAGTGATGAGTCTGGCCAAGTGTTATCTCAAAATAGGGGAATGCAAGGAAGAGCACACATGGTGGAGATGTACGAAAGATATAATAAAGGCCAAGGCCACTTTGGGATAGATAACAGAAACTACCAACCATCATCCGTGTTAATGAAACATCCGTATGATTTCAAAGCCACAGTCTCCTCAAGATTTCTGCCATGTGGGATAGTGAACAAGCAGTGGACAAAATCAAGTTCAGGGTGGAGAAATATTAACGGGATAGGGAAATCACACCTATTTGATATAAGGGATGCAATAACAAGAAGTGGATCTATTGGATGCAGAGAATTTATGGAAGAAAAGAGATGGCCTCATGGTGAAATAGTTGGATTTGGATCACAAGTCATAGTGGAACCTAATAATAATTCACCTCTATGGAGAACCAAAACTAGTTCTTGTGCTCCAGTCTTTTCGTCAACTCGTGCGCAATTTGATGCAAAGGTTCATGATATAAAAGATGGAATCATGAGATGTATAAATGAGGAAGAGCAATGGCGAGCAGGTGATGAGGTGAAAGCCCAATCAGAGAGGTTGAAGGAGAAGATCAAAGGGTCAAGTTTCTTAGAGTTAAGTTTAAGCCATCATGAGAACGTAAGAGAGAAGAACAACGTCTCATCATGTCCAGAAAATAACGATCAAGTTAATACGAAGCTTTCTCTTTCGTTGTTGTGA 1071 0.4118 MEARPNKKRSFLDLINEEAVVGDHGETSIIDDRSWSPQGNMSSNNSSTDQVRERTTSVRQYVRTKMPRLRWTPDLHLAFVLAVERLGGQQRASPKLVHQLMNVRGLSIAHVKSHLQMYRSKMSDESGQVLSQNRGMQGRAHMVEMYERYNKGQGHFGIDNRNYQPSSVLMKHPYDFKATVSSRFLPCGIVNKQWTKSSSGWRNINGIGKSHLFDIRDAITRSGSIGCREFMEEKRWPHGEIVGFGSQVIVEPNNNSPLWRTKTSSCAPVFSSTRAQFDAKVHDIKDGIMRCINEEEQWRAGDEVKAQSERLKEKIKGSSFLELSLSHHENVREKNNVSSCPENNDQVNTKLSLSLL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0790 356 SUPERFAMILY Homeodomain-like 65 123 IPR009057 -
Lele09g0790 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 123 IPR017930 -
Lele09g0790 356 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 67 121 IPR006447 GO:0003677
Lele09g0790 356 Gene3D - 66 122 - -
Lele09g0790 356 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 46 155 - -
Lele09g0790 356 MobiDBLite consensus disorder prediction 28 57 - -
Lele09g0790 356 MobiDBLite consensus disorder prediction 31 57 - -
Lele09g0790 356 Pfam Myb-like DNA-binding domain 69 119 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0790 Lele-ChrLele09 6232479 6236721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0790 55 185 G2-like Transcription Factor Family AT2G42660 51.515 6.38e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele09g0790 Myb_DNA-binding 9.4e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0790 09 6232479 6236721 Lele09g0790 09 6232479 6236721 ECH
Lele09g0790 09 6232479 6236721 Lele11g0793 11 8026206 8030030 hybridization
Lele09g0790 09 6232479 6236721 Lele12g0549 12 13824618 13826948 hybridization