Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0786 ATGGAGATGCATGGGTATAGAAGGAAGGCACAGATTGCACTAATCGCCATTATAGTGCTTGCTTCTGTAGCTGTGATCGCATTGTTAGTTGCCTTCATTTACTATTGCTACAGAAGGAACAAGGCTTACAAGCGCCATGAGAACCAATCATATGCTGATCATAACGGGAAAAGTGACTTTGCAAATCTGCAAGTTGTTGCTGATAATGGGCTTCTAGTGTTCACTTACAAGCAGTTGCATTCTGCAACTAATGGCTTTAGCAAGACAAATGTAATTGGCCATGGCGGATTCGGACTTGTTTACCAGGGAGTGCTCAACAATGGTGGGAATGCTGCAATTAAATTCATGGATGAGGCACGAAAGCAAGGAGAAGAAGAATTCAAAATAGAGGTGGAATTGCTCGGTCAATTGCGCTGCCCATATTTGCTGAAATTGCTTGGATATTGCTCTGATAGTAATCATAAATTTCTGGTTTACGAGTTCATGGCAAATGGGAGTCTGCAAGAACATCTTTATCCTGTCAGAAATTCTTATGTCACACCCATGAAATTGGATTGGAATACAAGGTTAAGAATAGCCCTAGAGGCTGCTAAGGGTTTGGAATATCTTCATGAACATGTGAGTCCCCCAGTTATCCACAGAGATTTTAAGAGCAGTAACATCCTCTTAGACAAACAATTTCATGCAAAAGTTTCAGACTTTGGATTAGCCAAACTCGGATCTGTTAAAGCCGGTGGACATGTTTCGACTCGCGTTTTGGGCACACACGGATATGTTGCCCCTGAATATGCACTAACTGGGCACTTAACAACCAAATCAGATGTTTACAGTTATGGCGTTGTTCTTCTCGAGCTGTTAACTGGTCGAGTACCAGTTGATATGAAGAGACCTCAGGGGGAAGGTGTTCTTGTTTCTTGGGCCTTGCCCTTATTGAATGATAGAGGAAATGTTTCAAAGATTGTGGATCCTACATTGGAAGGTCAGTACTCAATGAAAGAAGTTATCCAGGTAGCCGCCATTGCGGCACTGTGTGTTCAATCAGAAGCAGATTATAGGCCTCTCATGGCAGATGTTGTGCAGTCATTGGCTCCACTGGTGAAGACCCACAGGGCAACATCCTCAAAGGTTGGTAACTGCCGAAGTATCCATGTCAACAAGTTATCCCCACCTCAGAATTCAGTCAAAGCAACTATGTAA 1197 0.4294 MEMHGYRRKAQIALIAIIVLASVAVIALLVAFIYYCYRRNKAYKRHENQSYADHNGKSDFANLQVVADNGLLVFTYKQLHSATNGFSKTNVIGHGGFGLVYQGVLNNGGNAAIKFMDEARKQGEEEFKIEVELLGQLRCPYLLKLLGYCSDSNHKFLVYEFMANGSLQEHLYPVRNSYVTPMKLDWNTRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKQFHAKVSDFGLAKLGSVKAGGHVSTRVLGTHGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPQGEGVLVSWALPLLNDRGNVSKIVDPTLEGQYSMKEVIQVAAIAALCVQSEADYRPLMADVVQSLAPLVKTHRATSSKVGNCRSIHVNKLSPPQNSVKATM 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0786 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Lele09g0786 398 FunFam Receptor-like serine/threonine-protein kinase ALE2 162 379 - -
Lele09g0786 398 FunFam Putative LRR receptor-like serine/threonine-protein kinase 46 161 - -
Lele09g0786 398 PANTHER OS07G0668900 PROTEIN 65 372 - -
Lele09g0786 398 ProSiteProfiles Protein kinase domain profile. 86 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0786 398 SUPERFAMILY Protein kinase-like (PK-like) 69 362 IPR011009 -
Lele09g0786 398 Pfam Protein kinase domain 87 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0786 398 CDD STKc_IRAK 92 365 - -
Lele09g0786 398 Gene3D Phosphorylase Kinase; domain 1 46 161 - -
Lele09g0786 398 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Lele09g0786 398 Gene3D Transferase(Phosphotransferase) domain 1 162 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0786 Lele-ChrLele09 6205539 6208630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0786 4 389 Receptor kinase-like Gene Family AT3G58690 71.762 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele09g0786 Pkinase 1.5e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0786 09 6205539 6208630 Lele29g0631 29 3878619 3888753 CCT
Lele09g0786 09 6205539 6208630 Lele30g0767 30 12036181 12045341 CCT
Lele09g0786 09 6205539 6208630 Lele31g0911 31 16509495 16516605 CCT
Lele09g0786 09 6205539 6208630 Lele32g0615 32 3817959 3827265 CCT
Lele09g0786 09 6205539 6208630 Lele11g0788 11 7997942 8000452 hybridization