Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0785 ATGGCTTCCATGCCCTTGGGGCCGCACCACCATCAACCACCGCCGGCGACAGCTCAACAACCACCAACACAGGCGCAAGCTGGAAATGACCCACTGAAGTTGGCTGCTCGCCGTGGCTCCGATATGGAGACTGATAAGGAAATGTCAGCTACTGTTGTTGAGGGCAATGATGCAGTCACTGGCCACATAATATCCACCACAATTGGAGGCAAAAATGGGGAACCTAAACAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCCTGGAGACTGGCGAAACAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGGTACAAGAATCGTGAACTGCAGTTAATGCGTTTGATGGATCATCCAAATGTAATTTCTCTGAAGCACTGTTTCTTCTCTACAACTAGCAGGGATGAACTTTTTCTGAACTTGGTTATGGAATATGTACCTGAGACAATGTACCGAGTTATAAAACACTACAGTAGTATGAACCAGAGGATGCCTCTCATCTATGTGAAACTTTACACTTACCAAATCTTTAGGGGACTGGCATATATCCATACTGTACCTGGAGTTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTTGATCTTCTCACACATGAAGTGAAGCTTTGTGATTTTGGGAGTGCAAAAGTTTTGGTAAAGGGTGAACCAAACATTTCCTACATATGTTCACGTTACTATCGAGCTCCCGAACTAATATTTGGTGCGACAGAATACACAACTTCAATTGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAGCTTCTTCTAGGCCAGCCATTATTTCCAGGAGAAAATCAGGTGGACCAACTTGTGGAAATCATCAAGGTTCTTGGTACCCCAACTCGAGAAGAAATTCGTTGCATGAACCCAAATTATACAGATTTTAGATTTCCACAGATTAAAGCTCACCCTTGGCACAAGGTTTTTCATAAGCGAATGCCTCCTGAAGCGATTGACCTTGCTTCAAGGCTTCTCCAATATTCACCTAGTCTTCGATGTACTGCGCTGGAAGCATGTGCACATCCTTTCTTTGATGATCTTCGTGAACCTAATGCCAGACTACCTAATGGTTGCCCGCTGCCCCCGCTTTTCAACTTTAAACAGGAACTGTCCGGAGCATCACCTGAATAG 1194 0.4497 MASMPLGPHHHQPPPATAQQPPTQAQAGNDPLKLAARRGSDMETDKEMSATVVEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVIKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDLLTHEVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDDLREPNARLPNGCPLPPLFNFKQELSGASPE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0785 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lele09g0785 397 FunFam Shaggy-related protein kinase kappa 161 397 - -
Lele09g0785 397 SMART serkin_6 81 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0785 397 SUPERFAMILY Protein kinase-like (PK-like) 80 387 IPR011009 -
Lele09g0785 397 Pfam Protein kinase domain 81 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0785 397 MobiDBLite consensus disorder prediction 1 31 - -
Lele09g0785 397 Gene3D Phosphorylase Kinase; domain 1 66 160 - -
Lele09g0785 397 ProSiteProfiles Protein kinase domain profile. 81 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0785 397 CDD STKc_GSK3 76 368 IPR039192 -
Lele09g0785 397 ProSitePatterns Protein kinases ATP-binding region signature. 87 111 IPR017441 GO:0005524
Lele09g0785 397 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 45 396 - -
Lele09g0785 397 FunFam Glycogen synthase kinase-3 beta 65 160 - -
Lele09g0785 397 Gene3D Transferase(Phosphotransferase) domain 1 161 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0785 Lele-ChrLele09 6197141 6201403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0785 85 370 MAP Kinase Gene Family AT3G59790 35.354 1.11e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lele09g0785 Pkinase 1.3e-63 CL0016