Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele09g0783 | ATGTCAAGATCGTATACAAATCTTTTGGATTTGGCTTCAGGGAATTTCCCAGCAATGGGTAGGGAGTCTAAAGAAAGAAAGCGGCTGCCAAGAGTTATGACTGTCGCGGGGATAATTTCAGAACTTGATGATGATCAGGCACATAGCGTTTCTTCTGATAATCCATCAACTGTTTCTACAGATAGGATTATCATTGTAGCTAACCAGCTTCCTTTGAAAGCAAAGCGAAAGGAGGACAATAAGGGGTGGAGTTTCAGTTGGAATGAAGATTCCTTGCTTTTACAGCTTAAAGATGGATTTCCTGAAGAGATGGAGGTTCTTTATGTTGGGTCATTGCGGGTTGATGTTGATCCAGCCGAACAGGATGACGTGTCACAGTATTTATTGGATAAATTCAGTTGTGTTCCTACTTTTCTGCCCCCTGATGTTTTGACTAAATTTTATGATGGTTTCTGCAAAGGGCAAATATGGCCACTGTTTCATTACATGTTACCTTTTTCAACTGACAAAAACAACCGGTTTGATCGCTCTTTGTGGGAAGCCTATGTGATGGCAAATAAGATATTTTTTGAGAAGGTAGTTGAGGTAATAAACCCAGAGGATGATTATATTTGGATTCATGATTATCATTTGATGGTGTTGCCAACTTTTATTAGAAGACGCTTTAACAGGGTGAAAATGGGATTTTTTCTGCATAGCCCCTTTCCATCTTCAGAAATGTATAGGACTCTTCCTGTGAGGGAAGAGATACTTAAAGCTTTACTTAATTCCGATATCATTGGTTTCCACACCTTTGACTATGCTCGTCATTTCTTGTCCTGTTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCAAAGAGGGGCTACTTAGGATTGGAATATTATGGAAGGACTATAAGTATTAAGATTATGCCAGTTGGGGTTCACATGGATCGTATTAAAACAGTCATGAGAATGGCAGATGAAGAGTCTAAAGCAAAGGAGCTGAAACAGCAATTTGAAGGAAAAACTGTTTTACTTGGTGTTGATGATATGGACATTTTTAAAGGTGTTGATTTGAAGATTTTGGCTATGGAGCAGATGCTTAGTCAACATCCTAAATGGCAAGGAAGAGCTGTTTTGGTCCAGATAGTAAATCCTGCTAGGGGTAATGGTATACATCTAGAGGGCATACAGGCTGACATACAAGAAAGCTGCAACAGGATCAACAGAGTATTTGGGCGTCCTGGTTATGAACCTATTGTATTTATAGATAGACCGGTTTCTGTTGCAGAAAAAGCTGCTTATTATAGCATTGCTGAATGTGTTATTGTCACAGCTGTAAGAGATGGGATGAACCTAACCCCTTATGAATATATTGCTTGTAGACAAGAAATGCCTAGTTCTGAATCATGCACTAATGCCAATGGGTCAAAGAGCATGCTAGTGATATCAGAATTTGTTGGGTGTTCTCCATCACTTAGTGGGGCTATCCGTGTTAATCCATGGAATGTTGAAACAACTGCAGAGGCAATGAATGAGGCCATCTCAATGCCTGATGGAGAGAAGCAGTTGCGGCATGAAAAGCATTATCGATATGTTAGCACTCATGATGTGGCTTATTGGTCACGTAGTTTCTTACATGATATGGAGAGGGCTTGCTCGGACCTTCTGCAGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTCAGAGTTGTGGCACTTGATCCTAATTTTAGAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCGAAGAGTAGGGCCATTTTGTTGGACTATGATGGCACTGTTATGCCACAGAACTCTATTAATAAGAGTCCAGGTCCAGAGGTCATCTCTATTTTGAACACACTCGGTGCAGACTCCAAAAATGTAGTTTTCATTGTTAGTGGGAGGGGGAGGGATAGCTTAAGTAACTGGTTTACTCCCTGCAAAAGCCTTGGAATTGCTGCAGAACATGGATACTTCTTGAGGTGGTCTCAGTGTGAAGAATGGGAAATATGTGGAAAGAGCTCTGATTTTGGCTGGATGCAGATTGCCGAACCTGTAATGAAACTATATACAGAGGCAACTGATGGTTCTGGCATTGAAAAAAAGGAAAGTGCTTTGGTATGGCAATACCGGGATGCAGACCTTGATTTTGGATCTTCTCAGGCCAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAACCTGTTGCTGTGAAAAGTGGTCAGTTCATTGTGGAAGTAAAGCCCCAGGATGTGAGCAAAGGCTTAGTTGCAGAAAAGATCTTTTCATCAATGGATGCTCAAGGGAAACAGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGATATGTTTGAAATAATTAGTAGTTCTATCTCTAGAAATATTCTTTCTGCCAATTGTGCCGTATTCGCTTGCACAGTTGGACAAAAACCGAGCAAAGCCGAGTATTATTTGGATGATACGACTGAAGTCATTAGCATGCTAGAATCTTTAGCTGAAGAATCTGATTCTGCTTAA | 2538 | 0.4074 | MSRSYTNLLDLASGNFPAMGRESKERKRLPRVMTVAGIISELDDDQAHSVSSDNPSTVSTDRIIIVANQLPLKAKRKEDNKGWSFSWNEDSLLLQLKDGFPEEMEVLYVGSLRVDVDPAEQDDVSQYLLDKFSCVPTFLPPDVLTKFYDGFCKGQIWPLFHYMLPFSTDKNNRFDRSLWEAYVMANKIFFEKVVEVINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEMYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMDRIKTVMRMADEESKAKELKQQFEGKTVLLGVDDMDIFKGVDLKILAMEQMLSQHPKWQGRAVLVQIVNPARGNGIHLEGIQADIQESCNRINRVFGRPGYEPIVFIDRPVSVAEKAAYYSIAECVIVTAVRDGMNLTPYEYIACRQEMPSSESCTNANGSKSMLVISEFVGCSPSLSGAIRVNPWNVETTAEAMNEAISMPDGEKQLRHEKHYRYVSTHDVAYWSRSFLHDMERACSDLLQKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKSPGPEVISILNTLGADSKNVVFIVSGRGRDSLSNWFTPCKSLGIAAEHGYFLRWSQCEEWEICGKSSDFGWMQIAEPVMKLYTEATDGSGIEKKESALVWQYRDADLDFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSSMDAQGKQADFVLCVGDDRSDEDMFEIISSSISRNILSANCAVFACTVGQKPSKAEYYLDDTTEVISMLESLAEESDSA | 845 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele09g0783 | 845 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 316 | 528 | - | - | |
| Lele09g0783 | 845 | Gene3D | Glycogen Phosphorylase B; | 55 | 317 | - | - | |
| Lele09g0783 | 845 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 30 | 840 | IPR001830 | GO:0003824|GO:0005992 | |
| Lele09g0783 | 845 | CDD | GT20_TPS | 62 | 544 | IPR001830 | GO:0003824|GO:0005992 | |
| Lele09g0783 | 845 | SUPERFAMILY | HAD-like | 591 | 839 | IPR036412 | - | |
| Lele09g0783 | 845 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 61 | 547 | - | - | |
| Lele09g0783 | 845 | FunFam | Trehalose-6-phosphate synthase 2 | 674 | 753 | - | - | |
| Lele09g0783 | 845 | TIGRFAM | T6PP: trehalose-phosphatase | 588 | 839 | IPR003337 | GO:0003824|GO:0005992 | |
| Lele09g0783 | 845 | Pfam | Glycosyltransferase family 20 | 62 | 544 | IPR001830 | GO:0003824|GO:0005992 | |
| Lele09g0783 | 845 | TIGRFAM | HAD-SF-IIB: HAD hydrolase, family IIB | 593 | 795 | IPR006379 | - | |
| Lele09g0783 | 845 | CDD | HAD_TPP | 592 | 831 | - | - | |
| Lele09g0783 | 845 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 55 | 314 | - | - | |
| Lele09g0783 | 845 | Gene3D | - | 719 | 845 | IPR023214 | - | |
| Lele09g0783 | 845 | Gene3D | - | 590 | 693 | IPR023214 | - | |
| Lele09g0783 | 845 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 720 | 845 | - | - | |
| Lele09g0783 | 845 | Gene3D | Glycogen Phosphorylase B; | 318 | 529 | - | - | |
| Lele09g0783 | 845 | Pfam | Trehalose-phosphatase | 594 | 828 | IPR003337 | GO:0003824|GO:0005992 | |
| Lele09g0783 | 845 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 590 | 707 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele09g0783 | Lele-ChrLele09 | 6176632 | 6180748 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele09g0783 | 1 | 845 | Trehalose Biosynthesis Gene Families | AT1G06410 | 76.213 | 0.0 | 1348 |