Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0782 ATGAACACCAATTCCAACAATCTCACACCTTTACCTGGTGCTCGCCGATCTGTTGTAAGAGCTTATGATAACAACCATGGAGGTGGCTACGACGAGACGCCTGCGTTTTACCAATCATTTTCTATCCAAGCTACTCCTGATGACAGGATTTCAGGCGGGCAATATCCCCCAAGGTTGATGGAAGACAGAAGAACACTTTCAGGATTCAACCGCACACCCAGTTTTCCAACACAAGCACATGGCAGACAACAAATTAATGGATTCAATGGGAGCATAATAAGAAGGGGGTTGAACCCCATGTTGGGAGAGATTGTGCAGCAATCACCTCCTCCAAGAACAGTAGAAAATCCCAATTCAGCAGTTTTGAGCAAGCTGAAGAAAGAAATATATGAGCCCGCAAAGATTGCACCAAAGAGAGTGAGTTTATGTTACAAAGACAGTGTCGCAAATGCTTTAAAAGAGAGAGAGAGAGAGAGGCAAGAGCGACGTAAGAGGTGTGCTGTTTGCTTAGAAGATTTTGAACCTCGAGAAGAGGTTATGATCACACCATGCAAACATGTGTTTCATGAGGATTGTATTGTACCATGGGTAACAAGCAAAGGCCAATGCCCAGTTTGTAGGTTTGTGATTTCTGAGGAGACGAGAGAGCAAACTTCATCCTTCAACATGGCCATGACGAGACCCAGTGACCTTCTAATTGCAGGGGAGTTTCTATCAATTTTCAGAGCCATGCAAGACGCTCTCGAAATGGGCAATGGAACTTAG 765 0.4458 MNTNSNNLTPLPGARRSVVRAYDNNHGGGYDETPAFYQSFSIQATPDDRISGGQYPPRLMEDRRTLSGFNRTPSFPTQAHGRQQINGFNGSIIRRGLNPMLGEIVQQSPPPRTVENPNSAVLSKLKKEIYEPAKIAPKRVSLCYKDSVANALKERERERQERRKRCAVCLEDFEPREEVMITPCKHVFHEDCIVPWVTSKGQCPVCRFVISEETREQTSSFNMAMTRPSDLLIAGEFLSIFRAMQDALEMGNGT 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0782 254 CDD RING-H2_PA-TM-RING 166 207 - -
Lele09g0782 254 SMART ring_2 166 206 IPR001841 -
Lele09g0782 254 FunFam RING/U-box superfamily protein 150 224 - -
Lele09g0782 254 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 81 208 - -
Lele09g0782 254 ProSiteProfiles Zinc finger RING-type profile. 166 207 IPR001841 -
Lele09g0782 254 SMART ringv_2 165 207 IPR011016 GO:0008270
Lele09g0782 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 224 IPR013083 -
Lele09g0782 254 Pfam Ring finger domain 165 207 IPR001841 -
Lele09g0782 254 SUPERFAMILY RING/U-box 165 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0782 Lele-ChrLele09 6174316 6175930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0782 79 252 C3H Transcription Factor Family AT3G58720 38.421 1.66e-35 125